DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YB and Chrac-14

DIOPT Version :9

Sequence 1:NP_001286089.1 Gene:Nf-YB / 35261 FlyBaseID:FBgn0032816 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_476646.2 Gene:Chrac-14 / 3772329 FlyBaseID:FBgn0043002 Length:128 Species:Drosophila melanogaster


Alignment Length:117 Identity:32/117 - (27%)
Similarity:61/117 - (52%) Gaps:5/117 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 REQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDD 101
            |.:|..||...|.:::|..:|::..::|:||..|....|.|..|::|.:...:..:|.||:...|
  Fly     4 RIEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKD 68

  Fly   102 LLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYPHNEDGSSANDA 153
            :|...:.|.|:::|..|:..|:.||:..|..:.     |....:|.::|.:|
  Fly    69 ILQTLTELDFESFVPSLTQDLEVYRKVVKEKKE-----SKASKKDSNTAENA 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YBNP_001286089.1 CBFD_NFYB_HMF 42..105 CDD:279185 18/62 (29%)
Chrac-14NP_476646.2 H4 6..>93 CDD:390056 24/86 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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