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Protein Alignment Nf-YB and nfyb-1
DIOPT Version :9
Sequence 1: | NP_001286089.1 |
Gene: | Nf-YB / 35261 |
FlyBaseID: | FBgn0032816 |
Length: | 156 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_493740.1 |
Gene: | nfyb-1 / 173435 |
WormBaseID: | WBGene00021132 |
Length: | 403 |
Species: | Caenorhabditis elegans |
Alignment Length: | 143 |
Identity: | 63/143 - (44%) |
Similarity: | 84/143 - (58%) |
Gaps: | 28/143 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 NDMLVKEEDEASGDDSDKQDGGI------------------------MLREQDRFLPICNIIKIM 52
:|..:.||:|.:.||.: || :|.:|:|||||.|:::||
Worm 15 HDHGMPEEEEITEDDMN----GIHNIEEDTRTISEIAMELHHPNKSQVLLDQERFLPIANVVRIM 75
Fly 53 KVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEP 117
|..:....|:||||:||.|||||||||||:|||.|......|||:..||||.|....|||||.||
Worm 76 KTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTITADDLLTAMEATGFDNYAEP 140
Fly 118 LSIYLQKYRESNK 130
:.|:|||||:::|
Worm 141 MRIFLQKYRQAHK 153
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
80 |
1.000 |
Domainoid score |
I5602 |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0869 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1529111at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001364 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto20342 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101084 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11064 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R548 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X859 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
11 | 10.810 |
|
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