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Protein Alignment CG10462 and Zfp236

DIOPT Version :9

Sequence 1:	NP_609996.2	Gene:	CG10462 / 35260	FlyBaseID:	FBgn0032815	Length:	812	Species:	Drosophila melanogaster
Sequence 2:	XP_006255073.1	Gene:	Zfp236 / 291409	RGDID:	1309670	Length:	1848	Species:	Rattus norvegicus

Alignment Length:	858	Identity:	169/858 - (19%)
Similarity:	305/858 - (35%)	Gaps:	210/858 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    69 ESEDNPNPKHCDICQYKFKSQQDISSHRVHHE--------MNLHFCRLGCGIWLDTLEKILEHEY 125
            |.|.|..|..||.|...|..:.:::.|:..|.        .|..|.|:.     .....|:.||.
  Rat    60 EHEQNDKPHRCDQCPQTFNVEFNLTLHKCTHNAEDPVCPVCNKKFSRVA-----SLKAHIMLHEK 119

  Fly   126 RQHFQPGRVLCCRVC--DFMANSADDLASHMQKH--------IYVYRFVCSICRRHFESKQSLNL 180
            .::      |.|..|  :|..:|  .||.||::|        ::    .|..|::.||:...|..
  Rat   120 EEN------LICSECGDEFTLHS--QLAIHMEEHRQELANNRVH----TCKACKKEFETSPELKE 172

  Fly   181 HRKQ--------SQDFCSLLDFRKGSSSKPELVAVSTPVPEESNCYVQIK--EEPLNAEEADRML 235
            |.|.        ::.:...:| |.|.:........:...|.:...:::|.  |.|....|..: .
  Rat   173 HMKTHCKVRASGTRSYNRNID-RSGFTYSCPHCGKTFQKPSQLTRHIRIHTGERPFKCSECGK-A 235

  Fly   236 LEDNPPLNVKLEPQDEEMP------------------DVSRIKEEQSNGSVWTAIHTPLRNKLRL 282
            ......|...:.....|.|                  .|.|:..|..||..:.........| .|
  Rat   236 FNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFK-SL 299

  Fly   283 PALATTKNQMHL------KPGVKRNGLLTSNV-ESLNKKSNHSVISDDANIPISNQEPSNSSIAA 340
            .:|.|..::||:      ....:...::|:.: ::|..:...:.:|.     :|.::  ||....
  Rat   300 GSLNTHISKMHMGGPPNPSSSTETAHVITATIFQTLPLQQVEAQVSS-----VSGEQ--NSQAVT 357

  Fly   341 NILKVLPSNCMVIKLPPNTKIFKTPGQAPAAPKDSPTVTLSGTENSTNFIKIPKTISISTVGSMG 405
            ::::.|    :.:..|       .|.:|..:|:....::::...|.....:..:...:|::....
  Rat   358 DVIQQL----LELSEP-------GPVEAQQSPQSGRQLSVTVGINQDILQQALENSGLSSLPVAA 411

  Fly   406 NP----HASAKTVQPTQTHSRS-SCFLVDSFNNSKSR----PESMKIINEFRNQIRSIEKTLP-L 460
            .|    ||...||.....|:.| |....|..:..:.:    ||..:     :.:.:.::|..| |
  Rat   412 PPSDCSHAQTSTVSSQSPHTSSVSAEQADPMDAEQEKGQESPEKAE-----KKEKKILKKKSPFL 471

  Fly   461 PGTVLQSSKVTMDESTSSPMDAPKPVELMLNPSALMVARELEIQYPLYRFMWTCPLCQRMFEKHC 525
            ||::.:.:.|..........:..||.:|:         |.:.|.  .:...:.||.|.|.|....
  Rat   472 PGSIREENGVRWHVCPYCTKEFRKPSDLV---------RHIRIH--THEKPFKCPQCFRAFAVKS 525

  Fly   526 AFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDSANAATQRVHVPLNPQTPVPPPELPNTVNLPL 590
            ...||:.....:...||          :...:..:.:.:.:||:.|:  |.|.|...|:...
  Rat   526 TLTAHIKTHTGIKAFKC----------QYCMKSFSTSGSLKVHIRLH--TGVRPFACPHCDK--- 575

  Fly   591 LLSKTSA-----------------------PLTGQ----TSALSNVPVNKGLSPTSINIEKPKVS 628
             ..:||.                       |:.|:    ::.:.::|:.:.:..|.:.:.:|
  Rat   576 -KFRTSGHRKTHVASHFKHTELRKMRQQRKPVKGRAGKSSAPVPDIPLQEPILITDLGLIQP--- 636

  Fly   629 KKPKKNQSFQCTECLKVF-TTFGALRIHKSIHTGELPYQCSYCDKRFRTPGQVRVHHRRHTGEKP 692
              ..|||.||     ..| ..||        :..:.||:|.||.:.::....::.|.|.||||||
  Rat   637 --IPKNQFFQ-----NYFNNNFG--------NEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKP 686

  Fly   693 FKCKICSLDFTHRETLISHLSRHIGMKRYKCYGCDKYFVVVSGLR----AHRRLRPDTCG----- 748
            |||..|...|.....|.:|:..|.|:|.:||..|:..|.....||    .|..|||..|.
  Rat   687 FKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKT 751

  Fly   749 -KVKFTARAHGPRVRVIRGEVVFQYHPEHNGYLRSED--------------PLNI----LSQRDQ 794
             |.....:.|   ::..|.|:..|...........|:              |:.|    |.|..:
  Rat   752 FKTSLNCKKH---MKTHRYELAQQLQQHQEASSMDEESTVDQQSIQVSAPMPVEIESAELQQTPE 813

  Fly   795 TNSTPPETAIDTG 807
            |.:..||:.::.|
  Rat   814 TVAADPESILELG 826

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.