Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112310.1 | Gene: | Lifr / 81680 | RGDID: | 621431 | Length: | 1093 | Species: | Rattus norvegicus |
Alignment Length: | 1404 | Identity: | 260/1404 - (18%) |
---|---|---|---|
Similarity: | 459/1404 - (32%) | Gaps: | 497/1404 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 QMTAARP--IAALSLLVLSL------------------------LTWTHP------TIVDAA--H 34
Fly 35 PPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEP 99
Fly 100 VRAGRDDAPYECVAENGVGDAVSAD---ATLTIYEGDKTPA-GFP-------VITQGPGTR-VIE 152
Fly 153 VGHTVLMTCKAIGNPTPNIYWIKNQT--------------KVDMSNPRYSLKDGFLQIENSREED 203
Fly 204 QGKYECVAENSMGTEHSKATNLYVKVRRVPPTFSRPPETISEVMLGSNLNLSCIA--------VG 260
Fly 261 S---PMPHVKWMKGSEDLTPENEMPIGRNV-LQLINIQESANY-TCIAASTLGQIDSV--SVVKV 318
Fly 319 QSLPTAPTDVQISEVTATSVRLEWS------YKGPEDLQYYVIQ-YKPKNA-NQAFSEISGIITM 375
Fly 376 YYVVRALSPYTE-YEFYVIAVNNIGRGPPSAPATCTTGDFSFGGTKMES--APRNVQVRTLSSST 437
Fly 438 MVITWEPPETPNGQVTGYKV---YYTTNSNQPEASWNSQM---VDNSELTTVSELTPHAIYTVRV 496
Fly 497 QAYTSMGAGPMSTPVQVKAQQGVPSQPSNFRATDIGETAVTLQWTKPTHSSENIVHYELYWNDTY 561
Fly 562 ANQAHHKRISNSEAYTLDGLYPDTLYYIWLAARSQRGEGATTPPIPVRTKQYGAPPRNITAIATS 626
Fly 627 STTISLSWLPPPVERSNGRIIYYKVFFVEVGREDDEATTMTLNMTSIVLD-----ELK-RWTEYK 685
Fly 686 IWVLAGTSVGDGPRSHPIILRTQEDVPGDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIH 750
Fly 751 AQELRDEGKGFLNEPFKFDVVDTLEFNVTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVP 815
Fly 816 VRPTVSLKIMEREPIVSIELEWER-PAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKRFDNL 879
Fly 880 ERGVEYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITIRFQTPDVLCVTWDPPTREHRNGI 944
Fly 945 ITRYDVQFHK-----------KIDHGLGSERNM------TLRKAVFTNLEENTEYIFRVRAYTKQ 992
Fly 993 GAGPFSDKLIVETERDMGRAPMSLQAEATSEQTAEIWWEPVTSRGKLLGYKIFYTMTAVEDLDDW 1057
Fly 1058 QTKTVGLTESADLVNLE--KFAQYAVAIAARFKNGLGRL--------------SEKVTVRIKPED 1106
Fly 1107 V--PLNLRAHDVS----THSMTLSWSPPI---RLT-PVNYKISFDAMKVFVDSQGFSQTQIVPKR 1161
Fly 1162 E-----IILKHYVKTHTINELSPFTTYNVNVSAIPSDYSYRPPTKITVTTQMAAPQPMVKPDFYG 1221
Fly 1222 VVNGEEILVILPQASEEYGPISHYYLVVVPED----KSN 1256 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | 19/96 (20%) |
I-set | 36..129 | CDD:254352 | 19/95 (20%) | ||
IG_like | 146..227 | CDD:214653 | 17/95 (18%) | ||
Ig | 159..228 | CDD:299845 | 13/82 (16%) | ||
I-set | 234..318 | CDD:254352 | 22/98 (22%) | ||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | 19/82 (23%) | ||
fn3 | 324..404 | CDD:278470 | 16/88 (18%) | ||
FN3 | 423..514 | CDD:238020 | 19/98 (19%) | ||
FN3 | 520..610 | CDD:238020 | 13/89 (15%) | ||
FN3 | 616..707 | CDD:238020 | 24/96 (25%) | ||
FN3 | 712..810 | CDD:238020 | 10/97 (10%) | ||
FN3 | 832..907 | CDD:238020 | 13/75 (17%) | ||
FN3 | 914..1005 | CDD:238020 | 29/107 (27%) | ||
FN3 | 1012..1101 | CDD:238020 | 18/104 (17%) | ||
fn3 | 1106..1198 | CDD:278470 | 19/106 (18%) | ||
PTPc | 1476..1731 | CDD:214550 | |||
PTPc | 1503..1731 | CDD:238006 | |||
PTPc | 1763..2022 | CDD:214550 | |||
PTPc | 1791..2022 | CDD:238006 | |||
Lifr | NP_112310.1 | FN3 | 332..>368 | CDD:304408 | 5/35 (14%) |
FN3 | 432..526 | CDD:238020 | 25/152 (16%) | ||
WSXWS motif | 515..519 | 0/3 (0%) | |||
fn3 | <552..615 | CDD:278470 | 22/74 (30%) | ||
FN3 | 725..817 | CDD:238020 | 25/94 (27%) | ||
Box 1 motif | 865..873 | 2/11 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 908..941 | 5/32 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1003..1093 | 15/86 (17%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |