Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012812827.1 | Gene: | ptpru / 733850 | XenbaseID: | XB-GENE-922688 | Length: | 1439 | Species: | Xenopus tropicalis |
Alignment Length: | 1670 | Identity: | 429/1670 - (25%) |
---|---|---|---|
Similarity: | 673/1670 - (40%) | Gaps: | 398/1670 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 504 AGPMSTPVQVKAQQGVPSQPSNFRA-TDIGETAVT------LQWTKPTHSSENIVHYELYWND-- 559
Fly 560 --TY--ANQAHH---KR-------ISNSEAYTLDGLYPDTLYYIWLAARSQRGEGATTPPIPVRT 610
Fly 611 KQYGAPPRNITAIATSSTTISLSWLPPPVERSNGRIIYYKVFFVEVGREDDEATTMTLNMTSIVL 675
Fly 676 DELKRWTEYKI-----WVLAGTSVGDGPRSHPIILRTQEDVPGDPQDVKATPLNSTSIHVSWKPP 735
Fly 736 LEKDRNGIIRGYHIHAQELRDEGKGFLNEPFKFDVVDTLEFNVTG---LQPDTKYSIQVAALTRK 797
Fly 798 GDGDRSAAIVVKTPGGVPVRPTVSLKIMEREPIVSIELEWERPAQTYGELRGYRLRWGVKDQALK 862
Fly 863 EEMLSGPQMTKKRFDNLERGVEYEFRVAGSNHIGIGQETVKIFQTPEGTP---GGPPSNITIRFQ 924
Fly 925 TPDVLCVTWDPPTREHRNGIITRYDVQFHKKIDHGLGSERN-MTLRKAVFTNLEENTEYIFRVRA 988
Fly 989 YTKQGAG----PFSDKLIVETE-RDMGRAPMSLQAEATSEQTAEIWWEPVTSRGKLLGYKI---- 1044
Fly 1045 -FYTM----TAVEDLDDWQTKTVGLTESADLVNLEKFAQY-AVAIAARFKNGLGRLSEKVTVRIK 1103
Fly 1104 PEDVPLNLRAHDV----STHSMTLSWSPPIRLTPV--NYKISFDAMKVFVDSQGFSQTQIVPK-R 1161
Fly 1162 EIILKHYVKT-HTINELSPFTTYNVNVSAIPSDYSYRPPTKITVTTQMAA--------PQPMVKP 1217
Fly 1218 DFYGVVNGEEILVILPQASEEYGPISHYYLVVVPEDKSNLHK---IPDQFLTDDLLPGRNKPERP 1279
Fly 1280 ----NAPYIAAKFPQRSIP--FTFHLGSGDDYHNFTNRKLEREKRYRIFVRAVVDTPQKHLYTSS 1338
Fly 1339 PFSEFLSLDMREAPPGE------RPHRPDPNWPAEPEVSVNRNKDEPEILWVVLPLMVSTFIVST 1397
Fly 1398 ALIVLCVVKRRRQ------------------------PCKTP--------------DQAA----- 1419
Fly 1420 -----VTRPLM------AADLGAGP-----TPSDPVDMRRLNFQTPGMISHPPIPISEFANHIER 1468
Fly 1469 LKSNDNQKFSQEYESIEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINA 1533
Fly 1534 NYCD------GYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTR 1592
Fly 1593 GTETYGQIFVTITETQELATYSIRTFQLCRQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRR 1657
Fly 1658 CRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQY 1722
Fly 1723 IFIHDAILEAIICGVTEVPARNLHTHLQKLLITEPGETISGMEVEFKKLSNV--KMDSSKFVTAN 1785
Fly 1786 LPCNKHKNRLVHILPYESSRVYLTPIHGIEGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWR 1850
Fly 1851 MLWEHNSTIVVMLTKLKEMGRE-KCFQYWPHERSVRYQYYVVDPIAEYNMPQYKLREFKVTDARD 1914
Fly 1915 GSSRTVRQFQFIDW-PEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRSGVFITLS 1978
Fly 1979 IVLERMQYEGVLDVFQTVRILRSQRPAMVQTEDQYHFCYRAALEY 2023 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | |||
FN3 | 423..514 | CDD:238020 | 3/9 (33%) | ||
FN3 | 520..610 | CDD:238020 | 27/112 (24%) | ||
FN3 | 616..707 | CDD:238020 | 11/95 (12%) | ||
FN3 | 712..810 | CDD:238020 | 14/100 (14%) | ||
FN3 | 832..907 | CDD:238020 | 10/74 (14%) | ||
FN3 | 914..1005 | CDD:238020 | 17/95 (18%) | ||
FN3 | 1012..1101 | CDD:238020 | 24/98 (24%) | ||
fn3 | 1106..1198 | CDD:278470 | 26/99 (26%) | ||
PTPc | 1476..1731 | CDD:214550 | 126/260 (48%) | ||
PTPc | 1503..1731 | CDD:238006 | 115/233 (49%) | ||
PTPc | 1763..2022 | CDD:214550 | 84/262 (32%) | ||
PTPc | 1791..2022 | CDD:238006 | 76/232 (33%) | ||
ptpru | XP_012812827.1 | MAM | 27..183 | CDD:366209 | 46/274 (17%) |
IG_like | 192..278 | CDD:214653 | 17/124 (14%) | ||
fn3 | 287..366 | CDD:365830 | 15/92 (16%) | ||
fn3 | 490..568 | CDD:365830 | 23/84 (27%) | ||
PTP_DSP_cys | 931..1141 | CDD:391942 | 111/210 (53%) | ||
PTP_DSP_cys | 1227..1431 | CDD:391942 | 67/204 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |