DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and PTPRE

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:XP_047281532.1 Gene:PTPRE / 5791 HGNCID:9669 Length:733 Species:Homo sapiens


Alignment Length:692 Identity:292/692 - (42%)
Similarity:410/692 - (59%) Gaps:55/692 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1365 PAEPEVSVNRNKDEPEILWVVLPLMVSTFIVSTALIVLCVVKRRRQPCKTPD---------QAAV 1420
            |.:|..|      :|.:.|::|||::...::..|.......|:|:....|.|         :...
Human    71 PPDPGAS------QPLLAWLLLPLLLLLLVLLLAAYFFRFRKQRKAVVSTSDKKMPNGILEEQEQ 129

  Fly  1421 TRPLMAADLGAGPTPSDPVDMRRLNFQTPGMISHPPIPISEFANHIERLKSNDNQKFSQEYESIE 1485
            .|.::.:...:||.                  .:.|||:......|....::|.::|.:|:.|:.
Human   130 QRVMLLSRSPSGPK------------------KYFPIPVEHLEEEIRIRSADDCKQFREEFNSLP 176

  Fly  1486 PGQ-QFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYCDGYRKHNAYVATQ 1549
            .|. |.|::.:|.|.|:.||||.|:...|||||.|..::|:..||||||:|.|||::.|.::|.|
Human   177 SGHIQGTFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCSDYINASYIDGYKEKNKFIAAQ 241

  Fly  1550 GPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTRGTETYGQIFVTITETQELATYS 1614
            ||.|||..|||||.||.|:|||||:|.|:||...||.||||.:|..|||.|.|.:.:...|..|:
Human   242 GPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQYWPDQGCWTYGNIRVCVEDCVVLVDYT 306

  Fly  1615 IRTFQLCRQ-----GFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCS 1674
            ||.|  |.|     |....|.:.||.||:|||.|||..|...|:||::.:.|.|..:||::||||
Human   307 IRKF--CIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCS 369

  Fly  1675 AGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAILEAIICGVTE 1739
            |||||||.:||||:|:..|..|:.:|::..|:.:|.||..||||:.||.||:.|:||..:.|.||
Human   370 AGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTE 434

  Fly  1740 VPARNLHTHLQKLLITEPGETISGMEVEFKKLSNVKMDSSKFVTANLPCNKHKNRLVHILPYESS 1804
            :...:|..|||.:..|.......|:|.||:||:||::......|.|||.|..|.|::.|:||:.:
Human   435 LDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFN 499

  Fly  1805 RVYLTPIHGIEGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWRMLWEHNSTIVVMLTKLKEM 1869
            ||.|:...|.|.:||:|||||||||.:..:||.|||:....||||||:||..|..:||||:::|.
Human   500 RVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQER 564

  Fly  1870 GREKCFQYWPHERSVRYQYYVV----DPIAEYNMPQYKLREFKVT----DAR-DGSSRTVRQFQF 1925
            .::||:||||.|.||.:....:    |.::|    ...:|:|.||    .|| :...|.||||.|
Human   565 EQDKCYQYWPTEGSVTHGEITIEIKNDTLSE----AISIRDFLVTLNQPQARQEEQVRVVRQFHF 625

  Fly  1926 IDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRSGVFITLSIVLERMQYEGVL 1990
            ..|||.|:|..|:|.||.|..|.|.::|.| :.|||||||||.||:|.||.||.:|||::.||:|
Human   626 HGWPEIGIPAEGKGMIDLIAAVQKQQQQTG-NHPITVHCSAGAGRTGTFIALSNILERVKAEGLL 689

  Fly  1991 DVFQTVRILRSQRPAMVQTEDQYHFCYRAALEYLGSFDNYTN 2032
            ||||.|:.||.|||.||||.:||.|||:...:::..|.:|.|
Human   690 DVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYAN 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 122/241 (51%)
R-PTP-LAR-2 1784..2021 CDD:350402 122/245 (50%)
PTPREXP_047281532.1 R-PTPc-E-1 198..426 CDD:350468 115/229 (50%)
R-PTPc-E-2 513..722 CDD:350470 108/213 (51%)
Blue background indicates that the domain is not in the aligned region.

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