DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and LOC5667581

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:XP_061500185.1 Gene:LOC5667581 / 5667581 VectorBaseID:AGAMI1_012928 Length:643 Species:Anopheles gambiae


Alignment Length:516 Identity:128/516 - (24%)
Similarity:223/516 - (43%) Gaps:91/516 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 GSNLNLSCIAV----------------------GSPM---PHVKWMKG--SEDLTPENEMPIGRN 286
            |.|:.:||..|                      |||:   |.:..:.|  |..::|.:.      
Mosquito    44 GRNVTISCPGVNEHSLIDTLIWKTTQTVAEYVNGSPLVNNPRITLLPGNFSLHISPTSS------ 102

  Fly   287 VLQLINIQESANYTCIAASTLGQIDSVSVVKVQSLPTAPTDVQISEVTATSVRLEWSYKGPED-- 349
                   .::|.|||: .:.....::::.:.||.:|..|....:...|:.||.|.|::.  :|  
Mosquito   103 -------ADTAEYTCL-FNDRHSPEAIADLLVQDVPDPPGRPLVVSFTSRSVDLSWAHS--QDAR 157

  Fly   350 ---LQYYVIQYKPKNANQAFSEISGIIT----MYYVVRALSPYTEYEFYVIAVNNIGRGPPSAPA 407
               :..::|:.: ...|..::::..|.|    ..|.|..|.|:|.|.|.:||||.:|...||.. 
Mosquito   158 NAPVTNFIIETR-VGENGDWNQVPPIYTKSHLTTYQVTELLPFTVYSFRIIAVNELGHSTPSKE- 220

  Fly   408 TCTTGDFSFGGTKMESAPRNVQVRTL----SSSTMVITWE--PPETPNGQVTGYKVYYTTNSNQP 466
                   |:....:..||....|.|:    |::::.|:|:  ||:|..|:..||::.|.|....|
Mosquito   221 -------SYYFVTLREAPTGKPVTTIAHNTSATSVYISWKPPPPDTILGEFLGYRITYRTRDRHP 278

  Fly   467 EASWNSQMVDNS-ELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPVQVKAQQGVPSQPSNFRATD 530
            :......:.|:: |...:..|..:..|.|.:|.:...|.||.:| |.|...:|||::|.|....:
Mosquito   279 DDVKEIYIRDSTVESHEIHNLETYTQYLVSIQVFNPEGLGPPTT-VLVMTDEGVPTKPRNLSVLE 342

  Fly   531 IGETAVTLQWTKPTHSSENIVH-YELYWNDTYANQA--HHKRISNSEA------YTLDGLYPDTL 586
            |..|.:.:.|.:| .....::| |.:|:  .|.||.  |...:.|..|      |||..|.|.|.
Mosquito   343 ITSTTIRISWLEP-EKRNGVIHGYRVYY--VYQNQTLLHLPILKNDAAQNSVFYYTLTNLKPFTD 404

  Fly   587 YYIWLAARSQRGEGATTPPIPVRTKQYG-APPRNITAIATSSTTISLSWLPPPVERSNGRIIYYK 650
            |.|.:.|.:.:.:|..: .:.:||...| :||:.:.....|..|:..||..|.|..|:  |.:|.
Mosquito   405 YRIIVTAFTLKYDGEPS-EVSLRTDVGGPSPPKVLNLTCHSLDTLFFSWRIPRVYHSS--IDFYI 466

  Fly   651 VFFVEVGREDDEATTMTLNM----TSIVLDELKRWTEYKIWVLAGTSVGDGPRSHPIILRT 707
            |.:..:..:|.....::.|.    ||:|:..|...:.|::.|...|.....|:.  ::|.|
Mosquito   467 VNYRNLEYDDTHEIRISANASIVETSMVIPNLTTNSAYEVKVRGATVSTVNPKK--VVLGT 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401 16/96 (17%)
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401 3/7 (43%)
Ig strand C 264..270 CDD:409401 1/5 (20%)
Ig strand C' 272..274 CDD:409401 1/1 (100%)
Ig strand D 277..281 CDD:409401 1/3 (33%)
Ig strand E 286..291 CDD:409401 0/4 (0%)
Ig strand F 298..305 CDD:409401 3/6 (50%)
Ig strand G 309..318 CDD:409401 0/8 (0%)
FN3 322..411 CDD:238020 26/97 (27%)
FN3 <382..747 CDD:442628 96/347 (28%)
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401
R-PTP-LAR-2 1784..2021 CDD:350402
LOC5667581XP_061500185.1 None
Blue background indicates that the domain is not in the aligned region.

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