Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022209.1 | Gene: | clr-1 / 3565419 | WormBaseID: | WBGene00000548 | Length: | 1444 | Species: | Caenorhabditis elegans |
Alignment Length: | 1453 | Identity: | 376/1453 - (25%) |
---|---|---|---|
Similarity: | 548/1453 - (37%) | Gaps: | 405/1453 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 740 RNGIIRGYH---------IHAQELRDEGKGFLN---EPFKFDVVDTLEFNVTG------------ 780
Fly 781 ----LQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVRPTVSLKIMEREPIV---------- 831
Fly 832 SIELEWERPAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKRFDNLERGVEYEFRVAGSNHIG 896
Fly 897 IGQ---ETVKIFQTPEGTPGGPPSNITIRFQTPD--VLC-VTWDPPTREHRNGIITRYDVQFHKK 955
Fly 956 IDHGLGSERNMTLRKAVFTNLEENTEYIFRVRAYTKQGAGPFSDKLIVETERDMGRAPMSLQAEA 1020
Fly 1021 TSEQTAEIWWEPVTSRGKLLGYKIFYTMTAVEDLDDWQTKTVGLTESADLVN---------LEKF 1076
Fly 1077 AQYAVAIAARFKNGLGRL------SEKVTVRIKPE--DVPLNLRAHDVSTHSMTLSWSPP----- 1128
Fly 1129 ------IRLTPVNYKISFDAMKVFVDSQGFSQTQIVPKREIILKH-YVKTHTINELSPFTTYNVN 1186
Fly 1187 VSAIPSDYSYRPPTKITVTTQMAAPQPMVKPDFYGVVNGEEILVILPQASEE---YGPISHYYLV 1248
Fly 1249 VVPEDKSNLHKIPDQFLTDDLLPGRNKPERPNAPYIAAKFPQ-----RSIPFTFHLGSGDDYHNF 1308
Fly 1309 TNRKLEREKRYRIFVRAVVD---TPQKHLYTSSPFSEFLSLDMREAPPGERPHRPDPNWP----- 1365
Fly 1366 ----AEPEVSVNRNKDEPEILWVVLPLMVSTFIVSTALIVLCVVKRRRQPCKTPDQAAVTRPLMA 1426
Fly 1427 ADLGAGPTPSDPVDMRRLNFQTPGMISHPPIPISEFANHIERLKSNDNQKFSQEYESIEPGQQFT 1491
Fly 1492 WDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYCDGYRKHNAYVATQGPLQETF 1556
Fly 1557 VDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTRGTETYGQIFVTITETQELATYSIRTFQLC 1621
Fly 1622 RQG-------------------------FNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRAL 1661
Fly 1662 TPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIH 1726
Fly 1727 DAILEAIICGVTEVPARNLHTHLQKL---------------------------------LITEPG 1758
Fly 1759 ETISGMEVEFKKLS-NVKMD-SSKFVTANLPCNKHKNRLVHILPYESSRVYLTPIHGIEGSDYVN 1821
Fly 1822 ASFIDGYRYRSAYIAAQGPVQD-AAEDFWRMLWEHNSTIVVMLTKLKEMGREKCFQYWP------ 1879
Fly 1880 --HERSVRYQYYVVDPIAEYNMPQYKLREFKVTDARDGSS----RTVRQFQFIDWPEQG-VPKSG 1937
Fly 1938 EGFIDFIGQV-HKTKEQFGQDGPITVHCSAGVGRSGVFITLSIVLERMQYEGVLDVFQTVRILRS 2001
Fly 2002 QRPAMVQTEDQYHFCYRAALEYL 2024 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | |||
FN3 | 423..514 | CDD:238020 | |||
FN3 | 520..610 | CDD:238020 | |||
FN3 | 616..707 | CDD:238020 | |||
FN3 | 712..810 | CDD:238020 | 19/97 (20%) | ||
FN3 | 832..907 | CDD:238020 | 17/77 (22%) | ||
FN3 | 914..1005 | CDD:238020 | 16/93 (17%) | ||
FN3 | 1012..1101 | CDD:238020 | 19/103 (18%) | ||
fn3 | 1106..1198 | CDD:278470 | 21/103 (20%) | ||
PTPc | 1476..1731 | CDD:214550 | 106/279 (38%) | ||
PTPc | 1503..1731 | CDD:238006 | 95/252 (38%) | ||
PTPc | 1763..2022 | CDD:214550 | 102/275 (37%) | ||
PTPc | 1791..2022 | CDD:238006 | 90/245 (37%) | ||
clr-1 | NP_001022209.1 | IG_like | 175..258 | CDD:214653 | 8/33 (24%) |
FN3 | 403..523 | CDD:238020 | 34/196 (17%) | ||
PTPc | 827..1106 | CDD:214550 | 106/279 (38%) | ||
PTPc | 853..1106 | CDD:238006 | 95/252 (38%) | ||
PTPc | 1169..1437 | CDD:214550 | 102/275 (37%) | ||
PTPc | 1198..1437 | CDD:238006 | 90/244 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |