DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lar and Ptp36E

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_609872.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:649 Identity:195/649 - (30%)
Similarity:306/649 - (47%) Gaps:102/649 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1435 PSDPVDMR----------------RLNFQTPGMISHPPIPISEFANHIERLKSNDNQKFSQEYES 1483
            |:.|:|:|                :|.|||...:.      |....|  .||.|           
  Fly    79 PNGPIDIRHFLKLCDLRRKFPVLYKLEFQTAAKVE------SNTCRH--ALKKN----------- 124

  Fly  1484 IEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYCDGYRKHNAYVAT 1548
                        |||    ||:......||::||.|..|.|:..|||:||:|.|...|.|||:.|
  Fly   125 ------------NLE----KNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLLKPNAYIVT 173

  Fly  1549 QGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTRGT--ETYGQIFVTITETQELA 1611
            |||::||...:|||.|:...:.|||:|:..:..::.|.||||....  |.||.||:.|...::||
  Fly   174 QGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWPPNMEVHEQYGDIFINIVREEQLA 238

  Fly  1612 TYSIRTFQLC----RQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRALT-------PPE 1665
            .:.||||:|.    :|...|.|.|.|..:|.|..|..|...| .|:|.||.|.:.       ...
  Fly   239 NFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCPFSNA-LLEFRRRVRLVVGNIIKDEDDM 302

  Fly  1666 SGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAIL 1730
            .||::||||.|.||:|.|:.||:.||..:.|:..:::|::..||..|..:|:..:||.||:|.:.
  Fly   303 RGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKFIYDTLE 367

  Fly  1731 EAIICGVTEVPARNLHTHLQKLLITEPGETISGMEVEFKKLSNVKMDSSKFVTANLPC------- 1788
            |.||||.|..|...|...|:.......|..::..:.|:.::..   .:.:|...:  |       
  Fly   368 EHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEYDQICK---QTPRFTIGD--CAGGHRAD 427

  Fly  1789 NKHKNRLVHILPYESSRVYLTPIHGIEGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWRMLW 1853
            |:.|||.|..:|.::.|.|||...|...:||:|:.|:|||.....||..:.|::....:||.:::
  Fly   428 NREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVY 492

  Fly  1854 EHNSTIVVMLTKLKEMGREKCFQYWPHERSVR-----YQYYVVDPIAEYNMPQYKLREFKV---- 1909
            :...:.||:|.:.....::.. .:||::..:.     :..:.|...:..|:.|:   |||:    
  Fly   493 DQECSAVVVLCQPPSQSQQYP-SFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQW---EFKINKKI 553

  Fly  1910 ---TDARDG---SSRTVRQFQFIDWP-EQGVPKSGEGFIDFIGQVH--KTKEQFGQDGPITVHCS 1965
               |:...|   .:|||:.||...|| ...||.|....:..:..|.  :.|..:   ||:.|...
  Fly   554 VSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVDY---GPVCVVSP 615

  Fly  1966 AGVGRSGVFITLSIVLERMQYEGVLDVFQTVRILRSQRPAMVQTEDQYHFCYRAALEYLGSFDN 2029
            .|..|:||:...:..:|::...|.:||||.|:.:|..||.:|:...:|.:||...|.|:..|.|
  Fly   616 DGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHYVLHFLN 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 96/249 (39%)
R-PTP-LAR-2 1784..2021 CDD:350402 70/261 (27%)
Ptp36ENP_609872.1 Y_phosphatase 125..368 CDD:459674 96/247 (39%)
Y_phosphatase 428..671 CDD:459674 69/249 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.