DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and Ptpn7

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_796055.1 Gene:Ptpn7 / 320139 MGIID:2156893 Length:359 Species:Mus musculus


Alignment Length:352 Identity:117/352 - (33%)
Similarity:170/352 - (48%) Gaps:40/352 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1410 QPCKTPDQAAVTRPLMAADLGAGPTPSDP------VDMRR-------LNFQTPGMISHPPIPI-- 1459
            |.|:...:|.:....:.||:...|....|      :..||       |:.|:.|.:.    ||  
Mouse     3 QACEGRSRAQLPTLSLGADMTQPPPTKAPAKKHVRLQERRGSSVALMLDVQSLGTVE----PICS 63

  Fly  1460 ----SEFANHIERLKSNDNQKFSQEYESIEPGQ---QFTWDNSN--------LEHNKSKNRYANV 1509
                .|...|..|...:...:::.:::...|.|   :|....||        :..:.||:||..:
Mouse    64 VNTPREVTLHFLRTAGHPLTRWTLQHQPPSPKQLEEEFLKIPSNFVNPEDLDIPGHASKDRYKTI 128

  Fly  1510 TAYDHSRVQLPAVEGVVGSDYINANYCDGY-RKHNAYVATQGPLQETFVDFWRMCWELKTATIVM 1573
            .....|||.|...:....||||||||..|| .|...|:|||||:..|..|||.|.|:...:.|||
Mouse   129 LPNPQSRVCLGRAQSQEDSDYINANYIRGYDGKEKVYIATQGPMPNTVADFWEMVWQEDVSLIVM 193

  Fly  1574 MTRLEERTRIKCDQYWPTRGTETYGQIFVTITETQELATYSIRTFQLCRQGFNDRREIKQLQFTA 1638
            :|:|.| .:.||..||||. .|.||...:.|.:.:|...|::|  ||..|...:.|.:|.:.|:|
Mouse   194 LTQLRE-GKEKCVHYWPTE-EEAYGPFQIRIQDMKEHPEYTVR--QLTIQHQQECRSVKHILFSA 254

  Fly  1639 WPDHGVPDHPAPFLQFLRRCRA-LTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIY 1702
            ||||..|:...|.|:.:..... .|...|||::||||||:|||||:|......:::|....:||.
Mouse   255 WPDHQTPESAGPLLRLVAEVETPETAANSGPIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDIL 319

  Fly  1703 GHVTCLRAQRNYMVQTEDQYIFIHDAI 1729
            |.|..||..|..|:||.:||.|:|..:
Mouse   320 GIVCQLRLDRGGMIQTAEQYQFLHHTL 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 95/234 (41%)
R-PTP-LAR-2 1784..2021 CDD:350402
Ptpn7NP_796055.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 7/29 (24%)
Interaction with MAP kinases. /evidence=ECO:0000250 38..51 2/12 (17%)
PTPc-N7 105..349 CDD:350460 97/246 (39%)
Blue background indicates that the domain is not in the aligned region.

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