Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038939045.1 | Gene: | Ptprm / 29616 | RGDID: | 620776 | Length: | 1531 | Species: | Rattus norvegicus |
Alignment Length: | 1860 | Identity: | 503/1860 - (27%) |
---|---|---|---|
Similarity: | 735/1860 - (39%) | Gaps: | 551/1860 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 373 ITMYYVVRA---------LSPYTEYEFYVIAVNNIGRG-----PPSAPATC-----TTGDFSFGG 418
Fly 419 TKMESAPRNVQVRTLSSSTMVITWEPPETPNGQVTGYKVYYTTNSNQPEASWNSQMVDNSELTTV 483
Fly 484 SELTPHAI---YTVR---------VQAYTSMGAGPMSTPVQVKAQQGVPSQPSNFRATDIGETAV 536
Fly 537 TLQWTKPTHSSENIVHYELYWNDTY------ANQAHHKRISNSEAYTLDGLYPDTLYYIWLAARS 595
Fly 596 QRGEGATTPPIPVRTKQYGAPPRNITAIATSSTTISLSWLPPPVERSNGRIIYYKVFFVEVGRED 660
Fly 661 DEATTMTLNMTSI--------VLDELKRWT-EYKIWVLAGTSVGDGPRSHPIILRTQEDVP-GDP 715
Fly 716 Q--DVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELR-DEGKGFLNEPFKFDVVDTLEFN 777
Fly 778 VTGLQPDTKYSIQVAALTRKGDGDRSA---AIVVKTPGGVPVRPTVSLKIME---REPIVSIELE 836
Fly 837 WERPAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKRFDNLERGVEYEFRVAGSNHIGIGQET 901
Fly 902 VKIFQTPEGTPGGPPSNITIRFQTPDVLCVTWDPPTREHRNGIITRYDVQFHKKIDHGLGSERNM 966
Fly 967 TLRKAVFTNLEENTEYIFRVRAYTKQGAGPFSDKLIVETERDM-GRAPM-SLQAEATSEQTAEIW 1029
Fly 1030 WEPVTSRGKLLGYKIFYTMTAVEDLDDWQTKTVGLTESADLVNLEKFAQYAVAIAARFKNGLGRL 1094
Fly 1095 SEKVTVRIKPEDVPLNLRAHDVSTHSMTLSWSPPIRLTPVNYKISFDAMKVFVDSQGFSQTQIVP 1159
Fly 1160 KREIILKHYVKTHTINELSPFTTYNVNVSAIPSDYSYRPPTKITVTTQMAAPQPMVKPDFYGVVN 1224
Fly 1225 GEE--ILVILPQASEEYGPISHYYLVVVPEDKSNLHK---------IPDQFLTDDLLPGRNKPER 1278
Fly 1279 PNAPYIAAKFPQRSI----PFTFHLGSGDDYHNFTNRKLEREKRYRIFVRAV------------- 1326
Fly 1327 VDTPQKHLYT--SSPFSEFLSLDMREAP---PGERPHRPDPNWPAEPEVSVNRNKDEPEILWVVL 1386
Fly 1387 PLMVSTFIVSTALIVLCVVKRRRQPCKTPDQAAVTRPLMA----------ADLGAG--------- 1432
Fly 1433 -------------------------------PTPSDP-----VDMRRL----NFQTPGMIS---- 1453
Fly 1454 ----------------------HPPIPISEFANHIERLKSNDNQKFSQEYESIEPGQQFTWDNSN 1496
Fly 1497 LEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYCDGYRKHNAYVATQGPLQETFVDFWR 1561
Fly 1562 MCWELKTATIVMMTRLEERTRIKCDQYWPTRGTETYGQIFVTITETQELATYSIRTF-------- 1618
Fly 1619 ---------QLCRQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCS 1674
Fly 1675 AGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAILEAIICGVTE 1739
Fly 1740 VPA---RNLHTHLQKLLITEPGETISGMEVEFKKLSNVK-----MDSSKFVTANLPCNKHKNRLV 1796
Fly 1797 HILPYESSRVYLTPIHGIEGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWRMLWEHNSTIVV 1861
Fly 1862 MLTKLKEMGREKCFQYWPHERSVRY---QYYVVDPIAEYNMPQYKLREFKVTDARDGSSRTVRQF 1923
Fly 1924 QFIDWP-EQGVPKSGEGFIDFIGQVHKTKEQF-GQDGPITVHCSAGVGRSGVFITLSIVLERMQY 1986
Fly 1987 EGVLDVFQTVRILRSQRPAMVQTEDQYHFCYRAALEYLGS 2026 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | 10/44 (23%) | ||
FN3 | 423..514 | CDD:238020 | 21/102 (21%) | ||
FN3 | 520..610 | CDD:238020 | 13/95 (14%) | ||
FN3 | 616..707 | CDD:238020 | 17/99 (17%) | ||
FN3 | 712..810 | CDD:238020 | 30/104 (29%) | ||
FN3 | 832..907 | CDD:238020 | 15/74 (20%) | ||
FN3 | 914..1005 | CDD:238020 | 15/90 (17%) | ||
FN3 | 1012..1101 | CDD:238020 | 21/89 (24%) | ||
fn3 | 1106..1198 | CDD:278470 | 8/91 (9%) | ||
PTPc | 1476..1731 | CDD:214550 | 138/271 (51%) | ||
PTPc | 1503..1731 | CDD:238006 | 128/244 (52%) | ||
PTPc | 1763..2022 | CDD:214550 | 99/268 (37%) | ||
PTPc | 1791..2022 | CDD:238006 | 89/235 (38%) | ||
Ptprm | XP_038939045.1 | FN3 | 298..377 | CDD:214495 | 29/93 (31%) |
FN3 | 399..493 | CDD:238020 | 34/188 (18%) | ||
fn3 | 515..590 | CDD:394996 | 24/173 (14%) | ||
R-PTPc-M-1 | 946..1235 | CDD:350481 | 144/289 (50%) | ||
R-PTPc-M-2 | 1321..1526 | CDD:350483 | 78/207 (38%) | ||
MAM | 42..198 | CDD:214533 | 39/227 (17%) | ||
ig | 208..290 | CDD:395002 | 17/92 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4228 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |