Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038938979.1 | Gene: | Ptprs / 25529 | RGDID: | 3452 | Length: | 1926 | Species: | Rattus norvegicus |
Alignment Length: | 2101 | Identity: | 974/2101 - (46%) |
---|---|---|---|
Similarity: | 1277/2101 - (60%) | Gaps: | 273/2101 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 TWTHPTIVD-----------------AAHPPEIIRKPQNQ-GVRVGGVASFYCAARGDPPPSIVW 69
Fly 70 RKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDK 134
Fly 135 TPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKD-------- 191
Fly 192 -GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK----VRRVPPTFSRPPETISEVMLGSN 251
Fly 252 LNLSCIAVGSPMPHVKWMKGSEDLTPENEMPIGRNVLQLINIQESANYTCIAASTLGQIDSVSVV 316
Fly 317 KVQSLPTAPTDVQISEVTATSVRLEWSYKGPEDLQYYVIQYKPKNANQAFSEISGIITMYYVVRA 381
Fly 382 LSPYTEYEFYVIAVNNIGRGPPSAPATCTTGDFSFGGTKMESAPRNVQVRTLSSSTMVITWEPPE 446
Fly 447 TPNGQVTGYKVYYTTNSNQPEASWNSQMVDNSELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPV 511
Fly 512 QVKAQQGVPSQPSNFRATDIGETAVTLQWTKPTHSSENIVHYELYWNDTYANQAHHKRISNSEAY 576
Fly 577 TLDGLYPDTLYYIWLAARSQRGEGATTPPIPVRTKQY--GAPPRNITAIATSSTTISLSWLPPPV 639
Fly 640 ERSNGRIIYYKVFFVEVGRED---DEATTMTLNMTSIVLDELKRWTEYKIWVLAGTSVGDGPRSH 701
Fly 702 PIILRTQEDVP-GDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELRDEG------- 758
Fly 759 --KGFLNEPFKFDVVDTLEFN--VTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVRPT 819
Fly 820 VSLKIMEREPIVSIELEWERPAQTYGE-LRGYRLRWGVKDQALKEEMLSGPQMTKKRF-DNLERG 882
Fly 883 VEYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPP------SNITIRFQTPDVLCVTWDPPTREHR 941
Fly 942 NGIITRYDVQFHKKIDHG------------LGSERNMTLRKAVFTNLEENTEYIFRVRAYTKQGA 994
Fly 995 GPFSDKLIVETERDMGRAPMSLQAEATSEQTAEIWWEPVTSRGKLLGYKIFYTMTAVEDLDDWQT 1059
Fly 1060 KTVGLTESADLVNLEKFAQYAVAIAARFKNGLGRLSEKVTVRIKPEDVPLNLRAHDVSTHSMTLS 1124
Fly 1125 WSPPIRL-TPVNYKISFDAMKVFVDSQGFSQTQIVPKREIILKHYVKTHTINELSPFTTYNVNVS 1188
Fly 1189 AIPSDYSYRPPTKITVTT--QMAAPQPMV--KPDFYGVVNGEEILVILPQASEEYGPISHYYLVV 1249
Fly 1250 VPEDKSN------LHKIPDQFLTDDLLPGRNKPERPN----------APYIAAKFPQRSIPFTFH 1298
Fly 1299 LGSGDDYHNFTNRKLEREKRYRIFVRAVVDTPQKH--LYTSSPFSEFLSLDMREAPPGERPHRPD 1361
Fly 1362 PNWPAEPEVSVNRNKDEPEILWVVLPLMVSTFIVSTALIVLCVVKRRRQP-CKTPDQAAVTRPLM 1425
Fly 1426 -AADLGAGPTPSDPVDMRRLNFQTPGMISHPPIPISEFANHIERLKSNDNQKFSQEYESIEPGQQ 1489
Fly 1490 FTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYCDGYRKHNAYVATQGPLQE 1554
Fly 1555 TFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTRGTETYGQIFVTITETQELATYSIRTFQ 1619
Fly 1620 LCRQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYI 1684
Fly 1685 VIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAILEAIICGVTEVPARNLHTHL 1749
Fly 1750 QKLLITEPGETISGMEVEFKKLSNVKMDSSKFVTANLPCNKHKNRLVHILPYESSRVYLTPIHGI 1814
Fly 1815 EGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWRMLWEHNSTIVVMLTKLKEMGREKCFQYWP 1879
Fly 1880 HERSVRYQYYVVDPIAEYNMPQYKLREFKVTDARDGSSRTVRQFQFIDWPEQGVPKSGEGFIDFI 1944
Fly 1945 GQVHKTKEQFGQDGPITVHCSAGVGRSGVFITLSIVLERMQYEGVLDVFQTVRILRSQRPAMVQT 2009
Fly 2010 EDQYHFCYRAALEYLGSFDNY 2030 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | 44/94 (47%) |
I-set | 36..129 | CDD:254352 | 43/93 (46%) | ||
IG_like | 146..227 | CDD:214653 | 40/89 (45%) | ||
Ig | 159..228 | CDD:299845 | 37/77 (48%) | ||
I-set | 234..318 | CDD:254352 | 48/83 (58%) | ||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | 42/67 (63%) | ||
fn3 | 324..404 | CDD:278470 | 33/79 (42%) | ||
FN3 | 423..514 | CDD:238020 | 48/90 (53%) | ||
FN3 | 520..610 | CDD:238020 | 29/89 (33%) | ||
FN3 | 616..707 | CDD:238020 | 35/93 (38%) | ||
FN3 | 712..810 | CDD:238020 | 44/109 (40%) | ||
FN3 | 832..907 | CDD:238020 | 23/76 (30%) | ||
FN3 | 914..1005 | CDD:238020 | 31/108 (29%) | ||
FN3 | 1012..1101 | CDD:238020 | 2/88 (2%) | ||
fn3 | 1106..1198 | CDD:278470 | 22/92 (24%) | ||
PTPc | 1476..1731 | CDD:214550 | 179/254 (70%) | ||
PTPc | 1503..1731 | CDD:238006 | 158/227 (70%) | ||
PTPc | 1763..2022 | CDD:214550 | 207/258 (80%) | ||
PTPc | 1791..2022 | CDD:238006 | 190/230 (83%) | ||
Ptprs | XP_038938979.1 | I-set | 33..124 | CDD:400151 | 43/93 (46%) |
Ig strand A | 33..36 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 42..45 | CDD:409353 | 1/2 (50%) | ||
Ig strand B | 50..57 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 63..68 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 71..73 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 80..84 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 86..93 | CDD:409353 | 2/7 (29%) | ||
Ig strand F | 103..111 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 114..124 | CDD:409353 | 3/10 (30%) | ||
IgI_2_RPTP_IIa_LAR_like | 137..232 | CDD:409400 | 43/94 (46%) | ||
Ig strand B | 152..156 | CDD:409400 | 1/3 (33%) | ||
Ig strand C | 165..169 | CDD:409400 | 1/3 (33%) | ||
Ig strand E | 196..200 | CDD:409400 | 2/3 (67%) | ||
Ig strand F | 210..215 | CDD:409400 | 4/4 (100%) | ||
Ig strand G | 222..225 | CDD:409400 | 0/2 (0%) | ||
IgI_3_RPTP_IIa_LAR_like | 245..326 | CDD:409401 | 46/81 (57%) | ||
Ig strand B | 259..263 | CDD:409401 | 1/3 (33%) | ||
Ig strand C | 272..276 | CDD:409401 | 2/3 (67%) | ||
Ig strand E | 293..297 | CDD:409401 | 3/3 (100%) | ||
Ig strand F | 305..310 | CDD:409401 | 4/4 (100%) | ||
Ig strand G | 318..321 | CDD:409401 | 0/2 (0%) | ||
FN3 | 329..418 | CDD:238020 | 36/88 (41%) | ||
FN3 | 425..517 | CDD:238020 | 49/91 (54%) | ||
FN3 | 522..610 | CDD:238020 | 29/89 (33%) | ||
FN3 | 618..712 | CDD:238020 | 35/93 (38%) | ||
FN3 | 720..825 | CDD:238020 | 43/106 (41%) | ||
FN3 | 833..909 | CDD:214495 | 25/81 (31%) | ||
FN3 | 935..1023 | CDD:238020 | 29/97 (30%) | ||
FN3 | 1028..1111 | CDD:238020 | 26/174 (15%) | ||
PTP_tm | <1217..1301 | CDD:408631 | 34/109 (31%) | ||
R-PTPc-S-1 | 1348..1629 | CDD:350473 | 196/280 (70%) | ||
R-PTP-S-2 | 1631..1920 | CDD:350475 | 226/288 (78%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 422 | 1.000 | Domainoid score | I609 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4228 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1249 | 1.000 | Inparanoid score | I163 |
OMA | 1 | 1.010 | - | - | QHG47937 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001053 | |
OrthoInspector | 1 | 1.000 | - | - | otm45268 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100623 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X953 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.770 |