DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lar and Il31ra

DIOPT Version :9

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:XP_006517683.1 Gene:Il31ra / 218624 MGIID:2180511 Length:733 Species:Mus musculus


Alignment Length:732 Identity:144/732 - (19%)
Similarity:228/732 - (31%) Gaps:238/732 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 WSYKGPEDLQYYVIQYKPKNANQAF----------------SEISGIITMYYVVRALSPYTEYEF 390
            |::.........|:..||:|.:..|                ::.|.|:|:.|.. ..|.|::   
Mouse    24 WAFSFLCKFSLAVLPTKPENISCVFYFDRNLTCTWRPEKETNDTSYIVTLTYSY-GKSNYSD--- 84

  Fly   391 YVIAVNNIGRGPPSAPATCT-------------TGDFSFGGTKME------------SAPRNVQV 430
                  |......|.|.:|.             .||   |..|.:            ..|..:.|
Mouse    85 ------NATEASYSFPRSCAMPPDICSVEVQAQNGD---GKVKSDITYWHLISIAKTEPPIILSV 140

  Fly   431 RTLSSSTMVITWEPPETPNG-----------------------------QVTGYKVY-------- 458
            ..:.:....|.|:|.|...|                             .:||.:.:        
Mouse   141 NPICNRMFQIQWKPREKTRGFPLVCMLRFRTVNSSHWTEVNFENCKQVCNLTGLQAFTEYVLALR 205

  Fly   459 YTTNSNQPEASWNSQMVDNSELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPVQVKAQQGVPSQP 523
            :..|.::..:.|:.:     |.....|..||.:...|:.....|. |.....:..|..:|.|...
Mouse   206 FRFNDSRYWSKWSKE-----ETRVTMEEVPHVLDLWRILEPADMN-GDRKVRLLWKKARGAPVLE 264

  Fly   524 SNF---------RATDIGE-TAVTLQWTKPTHSSENIVHYELYWNDTYANQAHHKRIS--NSEAY 576
            ..|         .:|::.| ..:|.|            .|||    ...:|||...::  ||...
Mouse   265 KTFGYHIQYFAENSTNLTEINNITTQ------------QYEL----LLMSQAHSVSVTSFNSLGK 313

  Fly   577 TLDGL--YPD----TLYYIWLAARSQRGEGATTPPIPVRTKQYGAPPRNI----TAIATSSTTIS 631
            :.:.:  .||    |..||    :|.              |.|.|.|..:    ::|....|.| 
Mouse   314 SQEAILRIPDVHEKTFQYI----KSM--------------KAYIAEPLLVVNWQSSIPAVDTWI- 359

  Fly   632 LSWLPPPVERSNGRIIYYKVFFVEVGREDDEATTMTLNMTSIVLDELKRWTEYKIWV--LAGTSV 694
            :.|||.........:.:             |:.:...|.| |..|:||.:|.|.|.|  :.|..|
Mouse   360 VEWLPEAAMSKFPALSW-------------ESVSQVTNWT-IEQDKLKPFTCYNISVYPVLGHRV 410

  Fly   695 GDGPRSHPIILRTQEDVPGDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELRDEGK 759
            |:   .:.|....:|..|....:.:...:...:..::||...:..|||.|..|.:..|  .:.||
Mouse   411 GE---PYSIQAYAKEGTPLKGPETRVENIGLRTATITWKEIPKSARNGFINNYTVFYQ--AEGGK 470

  Fly   760 GFLNEPFKFDVVDTLEFNVTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVRPTVSLKI 824
                |..|......|:.::..|...|.|::.|.|.||.| |.....|..|         |:|:.:
Mouse   471 ----ELSKTVNSHALQCDLESLTRRTSYTVWVMASTRAG-GTNGVRINFK---------TLSISV 521

  Fly   825 MEREPIVSIE----LEWERPAQTYGELRGYRL-----------------RW---GVKDQALKEEM 865
            .|...:.|:.    |.......|:|..:..||                 .|   |.|...:||..
Mouse   522 FEIVLLTSLVGGGLLLLSIKTVTFGLRKPNRLTPLCCPDVPNPAESSLATWLGDGFKKSNMKETG 586

  Fly   866 LSG-------------PQMTKKRFDNLERGVEYEFRVAGSNHIGIGQETV-----KIFQTPEGTP 912
            .||             ..:..|...|.|..:|    |..:...|.||.::     ..:.|....|
Mouse   587 NSGDTEDVVLKPCPVPADLIDKLVVNFENFLE----VVLTEEAGKGQASILGGEANEYVTSPSRP 647

  Fly   913 GGPPSNITIRFQTPDVL 929
            .|||..   .|:.|.||
Mouse   648 DGPPGK---SFKEPSVL 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 Ig 35..129 CDD:299845
I-set 36..129 CDD:254352
IG_like 146..227 CDD:214653
Ig 159..228 CDD:299845
I-set 234..318 CDD:254352
Ig3_RPTP_IIa_LAR_like 249..317 CDD:143216
fn3 324..404 CDD:278470 13/77 (17%)
FN3 423..514 CDD:238020 18/127 (14%)
FN3 520..610 CDD:238020 20/107 (19%)
FN3 616..707 CDD:238020 22/96 (23%)
FN3 712..810 CDD:238020 24/97 (25%)
FN3 832..907 CDD:238020 21/116 (18%)
FN3 914..1005 CDD:238020 7/16 (44%)
FN3 1012..1101 CDD:238020
fn3 1106..1198 CDD:278470
PTPc 1476..1731 CDD:214550
PTPc 1503..1731 CDD:238006
PTPc 1763..2022 CDD:214550
PTPc 1791..2022 CDD:238006
Il31raXP_006517683.1 FN3 133..225 CDD:238020 12/96 (13%)
FN3 432..505 CDD:214495 20/78 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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