DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and Ptprd

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:XP_036019731.1 Gene:Ptprd / 19266 MGIID:97812 Length:1966 Species:Mus musculus


Alignment Length:2129 Identity:996/2129 - (46%)
Similarity:1307/2129 - (61%) Gaps:282/2129 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ARPIAALSLLVLSLLTWTHPTIVDAAHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKN 72
            |||   ||||:...|      ...|..||...|.|.:|....||||||.|.|.|||.|.|||.|.
Mouse    12 ARP---LSLLLTFFL------CACAETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKK 67

  Fly    73 GKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPA 137
            |||||..:....:....|..|:|||:|:|..||:|.|||||.|.||: :|....||:...|:.|.
Mouse    68 GKKVSNQRFEVVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGE-ISVSTRLTVLREDQIPR 131

  Fly   138 GFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKD----------- 191
            |||.|..||..:|:|...|..|.|.|.|||.|.|.|.|:...||.||....:|.           
Mouse   132 GFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPI 196

  Fly   192 -GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK----VRRVPPTFSRPPETISEVMLGSN 251
             |.||||.|.|.|||||||||.||.||.:|...||||:    ||||||.||.|| |..|:|.|.:
Mouse   197 RGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRELREVRRVPPRFSIPP-TNHEIMPGGS 260

  Fly   252 LNLSCIAVGSPMPHVKWMKGSEDLTPENEMPIGRNVLQLINIQESANYTCIAASTLGQIDSVSVV 316
            :|::|:|||||||:||||.|:||||||::||||||||:|.::::||||||:|.||||.|::::.:
Mouse   261 VNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQI 325

  Fly   317 KVQSLPTAPTDVQISEVTATSVRLEWSYKGPEDLQYYVIQYKPKNANQAFSEISGIITMYYVVRA 381
            .|::||..|....::|.||||:.|.|....||.:.||:||:||||:.:.:.||.||.|..|.|..
Mouse   326 TVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAG 390

  Fly   382 LSPYTEYEFYVIAVNNIGRGPPSAPATCTTGDFSFGGTKMESAPRNVQVRTLSSSTMVITWEPPE 446
            ||||::|||.|:|||||||||.|.|....|.:     ....||||:||.|.|||:|:::.|:.||
Mouse   391 LSPYSDYEFRVVAVNNIGRGPASEPVLTQTSE-----QAPSSAPRDVQARMLSSTTILVQWKEPE 450

  Fly   447 TPNGQVTGYKVYYTTNSNQPEASWNSQMVDNSELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPV 511
            .||||:.||:||||.:..|...:|....|.:|::||:..|.|...|:|:|.|:||:|.||:|:.:
Mouse   451 EPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDI 515

  Fly   512 QVKAQQGVPSQPSNFRATDIGETAVTLQWTKPTHSSENIVHYELYWNDTYANQAHHKRIS--NSE 574
            ||..|.|||.||.||:|....||::.|.||.|  .|:.|..|||.:.|  .:|...:||:  ...
Mouse   516 QVITQTGVPGQPLNFKAEPESETSILLSWTPP--RSDTIASYELVYRD--GDQGEEQRITIEPGT 576

  Fly   575 AYTLDGLYPDTLYYIWLAARSQRGEGATTPPIPVRTKQY--GAPPRNITAIATSSTTISLSWLPP 637
            :|.|.||.|::|||..|:|||.:|.||:|..|..||.|.  .|||::|:..:.|||:|.:||.||
Mouse   577 SYRLQGLKPNSLYYFRLSARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPP 641

  Fly   638 PVERSNGRIIYYKVFFVEVGRED---DEATTMTLNMTSIVLDELKRWTEYKIWVLAGTSVGDGPR 699
            |||:.||.|..|.:.:..|..||   .|...:..:.|..:|::|::||||:|.|.|.|.||.||.
Mouse   642 PVEKQNGIITEYSLKYAAVDGEDFKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPE 706

  Fly   700 SHPIILRTQEDVP-GDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELRD-EGKGFL 762
            |..:::||.|||| |.|:.|:...:|:|::.|||:.|:...::|.||||.:|..::.: |.||  
Mouse   707 SLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKG-- 769

  Fly   763 NEPFKFDVV---------DTLEFN--VTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPV 816
             :|...||:         ||.|.:  ::||||:|.||:.|.|.|.||||.||...:|.|.|.||.
Mouse   770 -QPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPG 833

  Fly   817 RPTVSLKIMEREPIVSIELEWERPAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKR----FD 877
            :|.:   ::....:.:..::|..|..|:|.|:||||::|.||.    |.|:..:.::|.    ..
Mouse   834 KPRL---VINHTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDM----EPLTTLEFSEKEDHFTAT 891

  Fly   878 NLERGVEYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITIRFQTPDVLCVTWDPPTREHRN 942
            ::.:|..|.||::..|.:|.|:|.||....||..|.|.|.|:.....|...:.::|.||....||
Mouse   892 DIHKGASYVFRLSARNKVGFGEEMVKEISVPEEIPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN 956

  Fly   943 GIITRYDVQFHK------KIDHGL-GSERNMTLRKAVFTNLEENTEYIFRVRAYTKQGAGPFSDK 1000
            |:||:|.:.:..      .::|.: .::.:|||     |.|:.:|.|..:|||:|.:|.||:|..
Mouse   957 GVITKYTLLYRDINVPLLPMEHLIVPADTSMTL-----TGLKSDTTYDVKVRAHTSKGPGPYSPS 1016

  Fly  1001 LIVET-ERDMGRAPMSLQAEATSEQTAEIWWEPVTSRGKLLGYKIFYTMTAVEDLDDWQTKTVGL 1064
            :...| ..|......:...:|..:.:..:.||...:....:.:||.|        ||.:     :
Mouse  1017 VQFRTLPVDQAVFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILY--------DDGK-----M 1068

  Fly  1065 TESADLVNLEKFAQYAVAIAARFKNGLGRLSEKVTVRIKPEDVPLNLRAHDVSTHSMTLSWSPPI 1129
            .|..|                      ||.::|:.|.:|||           .::|..|:     
Mouse  1069 VEEVD----------------------GRATQKLIVNLKPE-----------KSYSFVLT----- 1095

  Fly  1130 RLTPVNYKISFDAMKVFVDSQGFSQTQIVPKREIILKHYVKTHTINELSPFTTYNVNVSAIPSDY 1194
                               ::|.|...        |:|.|                         
Mouse  1096 -------------------NRGNSAGG--------LQHRV------------------------- 1108

  Fly  1195 SYRPPTKITVTTQMAAPQPM-VKPDFYGVVNGEEILVI-LPQ--ASEEYGPISHYYLVVVPEDKS 1255
                       |...||..: .||.|.|..|.:.::.: ||.  |:|.   |..||:::||..||
Mouse  1109 -----------TAKTAPDVLRTKPAFIGKTNLDGMITVQLPDVPANEN---IKGYYIIIVPLKKS 1159

  Fly  1256 NLHKI-----PDQFLTDDLLPGRNKPER--------PNAPYIAAKFPQRSIPFTFHLGSGDDYHN 1307
            ....|     ||:...|:||...::..|        ...|||||.|.  .:|..|.||....|..
Mouse  1160 RGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAAHFD--VLPTEFTLGDDKHYGG 1222

  Fly  1308 FTNRKLEREKRYRIFVRAVVDTPQKHLYTSSPFSE-FLSLDMREAPPGERPHRPDPNWPAEPEVS 1371
            |||::|:..:.|..||.||:|..:..:|.:||:|: .:|:|:            ||. |...|  
Mouse  1223 FTNKQLQSGQEYVFFVLAVMDHAESKMYATSPYSDPVVSMDL------------DPQ-PITDE-- 1272

  Fly  1372 VNRNKDEPEILWVVLPLMVSTFIVSTALIVLCVVKRRRQPCKTPDQAAVTRPLMAADLGAGPTPS 1436
                  |..::|||.|::...||:...:.:| :.|..:...|..:..:....|..:.......|:
Mouse  1273 ------EEGLIWVVGPVLAVVFIICIVIAIL-LYKSSKPDRKRAESESRKSSLPNSKEVPSHHPT 1330

  Fly  1437 DPVDMRRLNFQTP----------------------------------------GMISHPPIPISE 1461
            |||::||||||||                                        ||.|||||||.|
Mouse  1331 DPVELRRLNFQTPALSSNSVPYASLIGSVSSLSSQTTTQSIYDNNSLPRFARKGMASHPPIPILE 1395

  Fly  1462 FANHIERLKSNDNQKFSQEYESIEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVV 1526
            .|:||||||:|||.|||||||||:|||||||::||||.||.|||||||.|||||||.|.|:||:.
Mouse  1396 LADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIP 1460

  Fly  1527 GSDYINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPT 1591
            ||||:||||.|||||.|||:||||.|.|||.|||||.||.::||:||||:||||:|:|||||||:
Mouse  1461 GSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPS 1525

  Fly  1592 RGTETYGQIFVTITETQELATYSIRTFQLCRQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLR 1656
            |||||:|.:.||:.:|.|||||.:|||.|.:.|.:::||::|.|||||||||||:||.|||.|||
Mouse  1526 RGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLR 1590

  Fly  1657 RCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQ 1721
            |.:...||::||::||||||||||||:||||:||||:||||.:|||||||.:|||||||||||||
Mouse  1591 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQ 1655

  Fly  1722 YIFIHDAILEAIICGVTEVPARNLHTHLQKLLITEPGETISGMEVEFKKLSNVKMDSSKFVTANL 1786
            |||||||:|||:.||.||||||||:.::|||...|.||.::|||:|||:|::.|..:|:|::|||
Mouse  1656 YIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANL 1720

  Fly  1787 PCNKHKNRLVHILPYESSRVYLTPIHGIEGSDYVNASFIDGYRYRSAYIAAQGPVQDAAEDFWRM 1851
            ||||.|||||:|:||||:||.|.||.|:|||||:||||:||||.:.||||.|||:.:..||||||
Mouse  1721 PCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAETTEDFWRM 1785

  Fly  1852 LWEHNSTIVVMLTKLKEMGREKCFQYWPHERSVRYQYYVVDPIAEYNMPQYKLREFKVTDARDGS 1916
            |||||||||||||||:|||||||.||||.|||.||||:||||:||||||||.||||||||||||.
Mouse  1786 LWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQ 1850

  Fly  1917 SRTVRQFQFIDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRSGVFITLSIVL 1981
            |||||||||.||||||||||||||||||||||||||||||||||:|||||||||:||||||||||
Mouse  1851 SRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVL 1915

  Fly  1982 ERMQYEGVLDVFQTVRILRSQRPAMVQTEDQYHFCYRAALEYLGSFDNY 2030
            |||:||||:|:||||::||:||||||||||||.||||||||||||||:|
Mouse  1916 ERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHY 1964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151 45/92 (49%)
Ig strand B 53..57 CDD:409353 3/3 (100%)
Ig strand C 66..70 CDD:409353 2/3 (67%)
Ig strand E 93..97 CDD:409353 2/3 (67%)
Ig strand F 108..113 CDD:409353 3/4 (75%)
Ig strand G 122..125 CDD:409353 1/2 (50%)
Ig 141..228 CDD:472250 45/98 (46%)
Ig strand B 157..161 CDD:409353 1/3 (33%)
Ig strand C 170..174 CDD:409353 1/3 (33%)
Ig strand E 192..196 CDD:409353 2/3 (67%)
Ig strand F 206..211 CDD:409353 4/4 (100%)
Ig strand G 218..221 CDD:409353 0/2 (0%)
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401 48/81 (59%)
Ig strand A 237..239 CDD:409401 1/1 (100%)
Ig strand A' 244..248 CDD:409401 1/3 (33%)
Ig strand B 251..259 CDD:409401 2/7 (29%)
Ig strand C 264..270 CDD:409401 4/5 (80%)
Ig strand C' 272..274 CDD:409401 0/1 (0%)
Ig strand D 277..281 CDD:409401 2/3 (67%)
Ig strand E 286..291 CDD:409401 3/4 (75%)
Ig strand F 298..305 CDD:409401 5/6 (83%)
Ig strand G 309..318 CDD:409401 1/8 (13%)
FN3 322..411 CDD:238020 45/88 (51%)
FN3 <382..747 CDD:442628 165/372 (44%)
FN3 712..810 CDD:238020 42/110 (38%)
FN3 832..898 CDD:214495 21/69 (30%)
FN3 <867..1269 CDD:442628 92/422 (22%)
fn3 914..998 CDD:394996 28/90 (31%)
R-PTPc-LAR-1 1498..1735 CDD:350401 170/236 (72%)
R-PTP-LAR-2 1784..2021 CDD:350402 199/236 (84%)
PtprdXP_036019731.1 I-set 31..123 CDD:400151 45/92 (49%)
Ig strand B 48..52 CDD:409390 3/3 (100%)
Ig strand C 61..65 CDD:409390 2/3 (67%)
Ig strand E 85..92 CDD:409390 3/6 (50%)
Ig strand F 103..108 CDD:409390 3/4 (75%)
Ig strand G 116..119 CDD:409390 1/2 (50%)
IgI_2_RPTP_IIa_LAR_like 135..234 CDD:409400 45/98 (46%)
Ig strand A 135..137 CDD:409400 0/1 (0%)
Ig strand A' 142..146 CDD:409400 1/3 (33%)
Ig strand B 149..158 CDD:409400 3/8 (38%)
Ig strand C 163..169 CDD:409400 3/5 (60%)
Ig strand C' 171..173 CDD:409400 0/1 (0%)
Ig strand D 182..186 CDD:409400 1/3 (33%)
Ig strand E 198..203 CDD:409400 3/4 (75%)
Ig strand F 212..219 CDD:409400 6/6 (100%)
Ig strand G 222..233 CDD:409400 5/10 (50%)
IgI_3_RPTP_IIa_LAR_like 247..328 CDD:409401 48/81 (59%)
Ig strand A 247..249 CDD:409401 1/1 (100%)
Ig strand A' 253..257 CDD:409401 1/3 (33%)
Ig strand B 260..268 CDD:409401 2/7 (29%)
Ig strand C 273..279 CDD:409401 4/5 (80%)
Ig strand C' 281..283 CDD:409401 0/1 (0%)
Ig strand D 286..290 CDD:409401 2/3 (67%)
Ig strand E 295..300 CDD:409401 3/4 (75%)
Ig strand F 307..314 CDD:409401 5/6 (83%)
FN3 312..>744 CDD:442628 195/440 (44%)
Ig strand G 318..327 CDD:409401 1/8 (13%)
fn3 721..820 CDD:394996 38/101 (38%)
FN3 <797..1135 CDD:442628 113/463 (24%)
FN3 930..1021 CDD:238020 28/95 (29%)
R-PTPc-D-1 1388..1671 CDD:350472 207/282 (73%)
R-PTP-D-2 1672..1963 CDD:350476 231/290 (80%)

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