DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and Ptpn13

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_035334.2 Gene:Ptpn13 / 19249 MGIID:103293 Length:2451 Species:Mus musculus


Alignment Length:1930 Identity:398/1930 - (20%)
Similarity:661/1930 - (34%) Gaps:551/1930 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 WRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV-----------------AENG 116
            ||:. ||:|.::.:.|:.....||.       .|.:.|:...|.                 |...
Mouse   813 WRET-KKISFSKKKITLQNTSDGIK-------HAFQTDSSKACQYLLHLCSSQHKFQLQMRARQS 869

  Fly   117 VGDAVSADATLTIYEGDKTPAGFPVIT-QGPGTRVIEVGHTVLMTCKAIGNPTPN---IYWIKNQ 177
            ..||           .|...|.|..:. |....|...:|..:  :..::.:.|.|   :..:..|
Mouse   870 N
QDA-----------QDIERASFRSLNLQAESVRGFNMGRAI--STGSLASSTINKLAVRPLSVQ 921

  Fly   178 TKV--DMSNPRYSLKDGFLQIENSREE--DQGKYECVAENSMGTEHSKATNLYVKVRRVPPTFSR 238
            .::  .:|:..:||   :..::||.:|  |:..:|........:.|..:.......|:.......
Mouse   922 AEILKRLSSSEWSL---YQPLQNSSKEKTDKASWEEKPRGMSKSYHDLSQASLCPHRKQVINMEA 983

  Fly   239 PPETISEVMLGSNLNLSCIAVGSPM-PHVKWMKGSEDLTPENEMPIGRNVLQLINIQESANYTCI 302
            .|:..:|:            ||.|: |..:  ..:|.|....::...::|..|....|..|:...
Mouse   984 LPQAFAEL------------VGKPLYPMAR--SDTESLAGLPKLDNSKSVASLNRSPERRNHESD 1034

  Fly   303 AAS-TLGQIDSVSVVKVQSLPTA-PTDVQISEVTATSVRLEWSYKGPEDLQYYVIQYK--PKNAN 363
            ::: ..||    :.|...|||:: .:..|:......::...||.....:.:..::..|  ||: .
Mouse  1035 SSTEDPGQ----AYVVGMSLPSSGKSSSQVPFKDNDTLHKRWSIVSSPEREITLVNLKKDPKH-G 1094

  Fly   364 QAF----SEISGIITMYYVVRALSPYTEYEFYVIAVNNIGRGPPSAPATCTTGD--FSFGGTKME 422
            ..|    .|..|.:.:...:.|::|               .||.........||  .|.....:|
Mouse  1095 LGFQIIGGEKMGRLDLGVFISAVTP---------------GGPADLDGCLKPGDRLISVNSVSLE 1144

  Fly   423 SAPRNVQVRTLSSS----TMVITWEP-------PETPNGQVTGYKVYYTTNSNQPEASWNSQMVD 476
            ....:..|..|.::    |:||: :|       |.||.....|.|.|    :.:|....:|.|  
Mouse  1145 GVSHHAAVDILQNAPEDVTLVIS-QPKEKPSKVPSTPVHFANGMKSY----TKKPAYMQDSAM-- 1202

  Fly   477 NSELTTVSELTPHAIYTVRVQAYTSMG------AGPMST-PVQVKAQQGVPSQPSNFRATDIGET 534
                 ..||..|....|:|....:..|      .|.:|: ..:.::.....||.:.|.|:.:|:.
Mouse  1203 -----DPSEDQPWPRGTLRHIPESPFGLSGGLREGSLSSQDSRTESASLSQSQVNGFFASHLGDR 1262

  Fly   535 AVTLQWTKPTHSSEN----IVHYELYWNDTYANQAHHKRISNSEAYTLDGLYPDTLYYIWLAARS 595
            .    |.:|.|||.:    ....|..::|:..::|..:.||:...: ||            .|.|
Mouse  1263 G----WQEPQHSSPSPSVTTKVNEKTFSDSNRSKAKRRGISDLIEH-LD------------CADS 1310

  Fly   596 QRGEGATTPPIPVRTKQYGAPPRNITAIATSSTTISLSWLPP-PVERSNGRIIYYKVFFVEVGRE 659
            .:.:...|.....:|.:........|:..||..|.|.|  || |.:          .|.||:.:.
Mouse  1311 DKDDSTYTSSQDHQTSKQEPSSSLSTSNKTSFPTSSAS--PPKPGD----------TFEVELAKT 1363

  Fly   660 DDEATTMTLNMTSIVLDELKRWTEY-KIWVLAGTSVGDGPRSHP---IILRTQEDVPGDPQDVKA 720
            |.   ::.:::|..|...::....| |..:..|.:..|| |.|.   ::......:.|.......
Mouse  1364 DG---SLGISVTGGVNTSVRHGGIYVKAIIPKGAAESDG-RIHKGDRVLAVNGVSLEGATHKQAV 1424

  Fly   721 TPLNSTS--IHV-----------------SWKPPLEKD-----------RNGIIRGYHIHAQELR 755
            ..|.:|.  :|:                 ...||.::|           :...::.|....::..
Mouse  1425 ETLRNTGQVVHLLLEKGQVPTSRERDPAGPQSPPPDQDAQRQAPEKVAKQTPHVKDYSFVTEDNT 1489

  Fly   756 DEGKGFLNEP---FKFDVVDTL---EFNVTGLQPDTKYSIQVAALTRKGD-GDRSAAIVVKTPGG 813
            .|.|.|.|..   |.|...|.|   :.|.:.::....:..|.||.:.|.| ||    :::|. .|
Mouse  1490 FEVKLFKNSSGLGFSFSREDNLIPEQINGSIVRVKKLFPGQPAAESGKIDVGD----VILKV-NG 1549

  Fly   814 VPVR---------------PTVSLKIMEREPIVSIELEWE------RPAQTYGELRGYRLRWGVK 857
            .|::               |.|||.:....|.|..|::..      .||.::             
Mouse  1550 APLKGLSQQDVISALRGTAPEVSLLLCRPAPGVLPEIDTTFLNPLYSPANSF------------- 1601

  Fly   858 DQALKEEMLSGPQMTKKRFDNLERGVEYEFR-VAG---------------SNHIGIGQ-ETVK-- 903
                    |:..:.|.:...::|:|...:.. |:|               |:|...|: ::|:  
Mouse  1602 --------LNSSKETSQPSSSVEQGASSDDNGVSGKTKNHCRAPSRRESYSDHSESGEDDSVRAP 1658

  Fly   904 --------------------------IFQTPEGTPG--------GPPSNITIRFQTPDVLCVTWD 934
                                      :|..|...||        .||.::     :|...|   .
Mouse  1659 AKMPNVTRVAAFPHEAPRSQEESICAMFYLPRKIPGKLESESSHPPPLDV-----SPGQTC---Q 1715

  Fly   935 PP--------TREHRNGIITRYDVQFHKKIDHGLGSERNMTLRKAVFTNLEENTEYIFRVRAYTK 991
            ||        |.:|...:.::            |..|.|:|..|....|..|::|....:..   
Mouse  1716 PPAECAPSDATGKHFTHLASQ------------LSKEENITTLKNDLGNHLEDSELEVELLI--- 1765

  Fly   992 QGAGPFSDKLIVETERDMGRAPMSLQAEATSEQTAEIWWEPVTSRGKLLGYKIFYTMTAVEDLDD 1056
                     .:|::|:......::..:::......::..:|....|:|   |....:..|.|.| 
Mouse  1766 ---------TLVKSEKGSLGFTVTKGSQSIGCYVHDVIQDPAKGDGRL---KAGDRLIKVNDTD- 1817

  Fly  1057 WQTKTVGLTESADLVNLEKFAQYAVAIAARFKNGLGRLSE------------KVTVRIKPEDVPL 1109
                ...:|.: |.|||.:.|...|.:.      |||:.|            .:||....|::..
Mouse  1818 ----VTNMTHT-DAVNLLRAAPKTVRLV------LGRILELPRMPVFPHLLPDITVTCHGEELGF 1871

  Fly  1110 NLRAHDVSTHSMTLSWSPPIRLTPVNYKI------SFDAMKVF-----VDSQGFSQTQIVPKREI 1163
            :|.....|.|.:       :.::.:|.:.      |...:.:.     |.:||.:........::
Mouse  1872 SLSGGQGSPHGV-------VYISDINPRSAAAVDGSLQLLDIIHYVNGVSTQGMTLEDANRALDL 1929

  Fly  1164 ILKHYVKTHTINELSPFTTYNVNVSAIPSDYSYRPP--TKITVTTQM-AAPQPMVKP-DFYGVVN 1224
            .|...|...|.:......|....:||         |  ||....|.| .:.||.:.| :.:..||
Mouse  1930 SLPSVVLKVTRDGCPVVPTTRAAISA---------PRFTKANGLTSMEPSGQPALMPKNSFSKVN 1985

  Fly  1225 GEEILVILPQASE-----------------------------EYGPISHYYLVVVPEDKSNL--- 1257
            ||.:...:..|.|                             :...:....|.||.|:..||   
Mouse  1986 GEGVHEAVCPAGEGSSSQMKESAGLTETKESNSRDDDIYDDPQEAEVIQSLLDVVDEEAQNLLNQ 2050

  Fly  1258 -HKIPDQFLTDDLLPGRNKPERPNAPYIAAKFPQRSIPFTFHLGSGDDYHNFTNRKLEREKRYRI 1321
             |........|.|......||..:..|..:..|: .:|.:...|.|.                  
Mouse  2051 RHATRRACSPDPLRTNGEAPEEGDTDYDGSPLPE-DVPESVSSGEGK------------------ 2096

  Fly  1322 FVRAVVDTPQKHLYTSSPFSEFLSLDMREAPPGERPHRPDPNWPAEPEVSVNRNKDEPEILWVVL 1386
                 ||           .:...:....|.|..|...:...|...|.....:.:||.|       
Mouse  2097 -----VD-----------LASLTAASQEEKPIEEDATQESRNSTTETTDGEDSSKDPP------- 2138

  Fly  1387 PLMVSTFIVSTALIVLCVVKRRRQPCKTPDQAAVTRPLMAADLGAGPTPSDPVDMRRLNFQTPGM 1451
                  |:.:..|..|.||       :.|.....|...:.|.:            |.|.    |:
Mouse  2139 ------FLTNEELAALPVV-------RVPPSGKYTGTQLQATI------------RTLQ----GL 2174

  Fly  1452 ISHPPIPISEFANHIERLKSNDNQKFSQEYESIEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSR 1516
            :.. .||..|..| ::.||..|.....|..|                 |:.||||.|:..||.:|
Mouse  2175 LDQ-GIPSKELEN-LQELKPLDQCLIGQTKE-----------------NRRKNRYKNILPYDTTR 2220

  Fly  1517 VQLPAVEGVVGSDYINANYCD---GYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLE 1578
            |.|....|     ||||::..   |.::. .|:|.||||..|..|||:|.||..:..|.|||:..
Mouse  2221 VPLGDEGG-----YINASFIRIPVGTQEF-VYIACQGPLPTTVGDFWQMVWEQNSTVIAMMTQEV 2279

  Fly  1579 ERTRIKCDQYWPT-RGTETYG--QIFVTITETQELATYSIRTFQLCRQGFNDRREIKQLQFTAWP 1640
            |..:|||.:|||: .||.|..  ::.:.:...|:|..:.:|...|......:.|.|..|.|||||
Mouse  2280 EGEKIKCQRYWPSILGTTTMANERLRLALLRMQQLKGFIVRVMALEDIQTGEVRHISHLNFTAWP 2344

  Fly  1641 DHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHV 1705
            ||..|..|...|.|:...|.:.  .|||||.|||||:||:|..|.||.:|..:..:...||...|
Mouse  2345 DHDTPSQPDDLLTFISYMRHIR--RSGPVITHCSAGIGRSGTLICIDVVLGLISQDLEFDISDLV 2407

  Fly  1706 TCLRAQRNYMVQTEDQYIFIHDAILEAIICGVTEVPARNLHTHLQ 1750
            .|:|.||:.|||||.||:|.:..||..:             ||||
Mouse  2408 RCMRLQRHGMVQTEGQYVFCYQVILYVL-------------THLQ 2439

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151 14/76 (18%)
Ig strand B 53..57 CDD:409353