DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and ZK484.7

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_491758.1 Gene:ZK484.7 / 191327 WormBaseID:WBGene00022753 Length:344 Species:Caenorhabditis elegans


Alignment Length:351 Identity:96/351 - (27%)
Similarity:153/351 - (43%) Gaps:63/351 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1404 VVKRRRQPCKTPDQAAVTRPLMAADLGAGPTPSDPVDMRRL-NFQTPGMISHPPIPISEFANHIE 1467
            |:::||....|.....|::    ..:..|.|.......::: .|....:...|....:|||   .
 Worm     4 VIQKRRTKKSTQKSKEVSQ----RTVDEGTTAEKKTHRKQIVKFVKNALEKGPAGLRAEFA---A 61

  Fly  1468 RLKSNDNQKFSQEYESIEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQL----PAVEGVVGS 1528
            ..:.||.:|.....|:.|.|               ||||.:|...||:||:|    |       .
 Worm    62 MKRFNDFEKMKAFKEAQEHG---------------KNRYKDVGCLDHNRVKLHPPWP-------H 104

  Fly  1529 DYINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYW---- 1589
            |||:||:.........::.||.||.::..|||.||.:.|..:|.|:..:.|:...||..|:    
 Worm   105 DYIHANFVSTPSNPRRFICTQAPLDKSCADFWYMCLQEKVDSIFMLCNIMEKGAKKCCDYFACKD 169

  Fly  1590 -PTRGTETYG-QIFVTITETQELATYSIRTFQLCRQGFNDR------REIKQLQFTAWPDHGVPD 1646
             |....|..| :|.|....|.::........::....|...      :::.|..:..|||.|||.
 Worm   170 KPVLEFEEKGHKIIVKFESTGKMKFEKNTDAKITETVFTVEGPGGLAQKVTQYHWIDWPDRGVPT 234

  Fly  1647 HPAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERM-------KHEKIIDIYGH 1704
            .....::.|    |.|.|..||.:||||||:||||..::|:.:|:::       :.:||:.    
 Worm   235 ADMAIVELL----AKTRPSKGPTVVHCSAGIGRTGSVVMIEYILDQLLGGQQIEETDKILQ---- 291

  Fly  1705 VTCLRAQRNYMVQTEDQYIFIHDAIL 1730
              .:|.|||..:||:.||:|:|..||
 Worm   292 --KIREQRNNSIQTDQQYLFVHQVIL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 78/256 (30%)
R-PTP-LAR-2 1784..2021 CDD:350402
ZK484.7NP_491758.1 Y_phosphatase 80..316 CDD:459674 79/268 (29%)
Blue background indicates that the domain is not in the aligned region.

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