DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and ZK354.8

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_500775.1 Gene:ZK354.8 / 191295 WormBaseID:WBGene00022709 Length:483 Species:Caenorhabditis elegans


Alignment Length:480 Identity:116/480 - (24%)
Similarity:191/480 - (39%) Gaps:122/480 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1314 EREKRYRIFVRA----------VVDTPQKHLYTSSPFS----------------EFLSLDMREAP 1352
            ||.|..|..:::          :|.||:|   |::..:                |.....|...|
 Worm    32 ERSKNERSVMQSIEQEEATNNEIVPTPKK---TTAQIAQQPTPTLPQIIAKQEPEVAMKTMMLPP 93

  Fly  1353 PGERPHRPDPNWPAE--PEVSVNRNKDEPEILWVVLPLMVSTFIVSTALIVLCVVKRRRQPCKTP 1415
            |.:.|..|.|..|.:  |:::.:....:|.::...||.|                          
 Worm    94 PSDPPPPPPPVAPHQPPPQLATSAQPPQPPVINSQLPRM-------------------------- 132

  Fly  1416 DQAAVTRPLMAADLGAGPTPSDPVDMRRLNFQTPGMISHPPIPISEFANH--IERLKSNDNQK-- 1476
            ..|....|.||..|...|:|...:.:||              |..|..:.  ::....:|.:|  
 Worm   133 SPAPAIPPSMAQPLLQSPSPGADIAIRR--------------PSKEKTDEKSVDETGGSDKKKRT 183

  Fly  1477 -----------------FSQEYESIEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEG 1524
                             ..:||.. .|.:......::...|.::|||.|:...|.:||:|     
 Worm   184 EVICSWIRLVLQNGVAGLKKEYRD-SPNEAPEDIATSFLGNPTRNRYRNIPCCDITRVKL----- 242

  Fly  1525 VVGSD----YINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKC 1585
               :|    ||:||..........::.||.||..|..:||:|........|||:..|.|:.:.|.
 Worm   243 ---TDDPHFYIHANLVSSGPNPRRFICTQAPLNGTIEEFWKMIIVTGIEYIVMLCELVEKGKPKS 304

  Fly  1586 DQYWPTR--GTETYGQIFVTITETQEL---ATYSIRTFQLCRQGFND-RREIKQLQFTAWPDHGV 1644
            .:|:|::  .|...|:: .|:|:...:   .|..:.|.::.:.|.|. .:.:|.:.:..||||||
 Worm   305 AEYFPSQIGQTTKIGRL-CTVTKESRVDIDKTLVMSTMRISKPGDNAVVKIVKHIHWRNWPDHGV 368

  Fly  1645 PDH---PAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVT 1706
            ||:   |...|..::.|       :.|::|||||||||||...:|..:||.:.....|.:...:.
 Worm   369 PDNFLSPFRLLTVVKNC-------TKPIVVHCSAGVGRTGTLALILIILESICLPDFIGVPRLLA 426

  Fly  1707 CLRAQRNYMVQTEDQYIFIHDAILE 1731
            .||.:|...||||.||::.|..:||
 Worm   427 KLREERFRAVQTEMQYLYAHRCVLE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 78/247 (32%)
R-PTP-LAR-2 1784..2021 CDD:350402
ZK354.8NP_500775.1 PTPc 200..451 CDD:214550 79/267 (30%)
Blue background indicates that the domain is not in the aligned region.

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