Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492100.1 | Gene: | T28F4.3 / 189059 | WormBaseID: | WBGene00012138 | Length: | 490 | Species: | Caenorhabditis elegans |
Alignment Length: | 362 | Identity: | 95/362 - (26%) |
---|---|---|---|
Similarity: | 157/362 - (43%) | Gaps: | 41/362 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1445 NFQTPGMISHPPIPISEFANHIER---------------LK----SNDNQKF--SQEYESIEPGQ 1488
Fly 1489 QFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVGSDYINANYC---DGYRKHNAYVATQG 1550
Fly 1551 PLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTRGTETYGQIFVTITE-TQEL-ATY 1613
Fly 1614 SIRTFQLCRQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCSAGVG 1678
Fly 1679 RTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAILEAIICGVTEVPAR 1743
Fly 1744 NLHTHLQKLLITEPGETISGMEVEFKKLSNVKMDSSK 1780 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | |||
FN3 | 423..514 | CDD:238020 | |||
FN3 | 520..610 | CDD:238020 | |||
FN3 | 616..707 | CDD:238020 | |||
FN3 | 712..810 | CDD:238020 | |||
FN3 | 832..907 | CDD:238020 | |||
FN3 | 914..1005 | CDD:238020 | |||
FN3 | 1012..1101 | CDD:238020 | |||
fn3 | 1106..1198 | CDD:278470 | |||
PTPc | 1476..1731 | CDD:214550 | 73/261 (28%) | ||
PTPc | 1503..1731 | CDD:238006 | 68/232 (29%) | ||
PTPc | 1763..2022 | CDD:214550 | 6/18 (33%) | ||
PTPc | 1791..2022 | CDD:238006 | |||
T28F4.3 | NP_492100.1 | PTPc | 58..312 | CDD:214550 | 75/268 (28%) |
PTPc | 86..312 | CDD:238006 | 68/233 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR19134 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |