DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and M04G7.2

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_499934.1 Gene:M04G7.2 / 187449 WormBaseID:WBGene00019773 Length:550 Species:Caenorhabditis elegans


Alignment Length:512 Identity:138/512 - (26%)
Similarity:210/512 - (41%) Gaps:103/512 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1309 TNRKLEREKRYRIFVRAVVDTPQKHLYTSSPFSEFLSLDMREAPP---GERPHRPDPNWPAEPEV 1370
            :|.|...||..|..|:.||.....|:    |||..........||   |.|...      |..:|
 Worm    69 SNSKGSNEKHKRKSVQQVVKKVVNHI----PFSPSKQPKSTSTPPVSEGNRKRL------AMADV 123

  Fly  1371 SVNR---------NKDEPEILWVVLPLMVSTFIVSTALIVLCVVKRRRQP-----CKTPDQAA-- 1419
            |:|:         .|.||.      ....:.:|.|.:|      .|..:.     .||..|.|  
 Worm   124 SINQLESEMDSFVKKIEPN------ERRATQYIHSNSL------SRSNEAVPPGNVKTSQQKADH 176

  Fly  1420 ----VTRPLMAAD-----LGAGPTPSDPVDMRRLNFQTPGM-------------ISHPPIPIS-- 1460
                .||.|:..|     :.:..|.:.| |..:|...:|..             .::..|.::  
 Worm   177 HLIRTTRSLIGLDGETEAVYSKATKASP-DKGKLTADSPSSRRTSKSLEENSSETTNDSISLADD 240

  Fly  1461 ------------EFANHIERLKSNDNQKFSQEYESIEPGQQFTWDNSNLEH--NKSKNRYANVTA 1511
                        :||...:::..:|   |.||:.:: ||...:...:...|  |..||||:|:..
 Worm   241 EETREAYRKLFKDFAMSSQKMTLDD---FKQEFSNL-PGDPPSDLCTVFNHPVNNKKNRYSNIPC 301

  Fly  1512 YDHSRVQLP-AVEGVVGSDYINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMT 1575
            .|.|||||. .:.....:|||:|||.........|:.||||.:||..|||||.|:..|..|||:.
 Worm   302 LDISRVQLKFKMPNKNSTDYIHANYIRSPFLKRGYILTQGPKKETRADFWRMIWQENTTAIVMLC 366

  Fly  1576 RLEERTRIKCDQYWPTRG-----TETYGQIFVTITETQELATYSIRTFQLCRQGFNDRREIKQLQ 1635
            :..|..|.||.:|:|...     .:.:...:...|..:.|.|..:   .|..:|  :.|.|....
 Worm   367 QFLETNREKCAEYFPRNAHCCLQFDKFSVNYEDSTVNKSLVTTRL---NLSYEG--ETRLITHWL 426

  Fly  1636 FTAWPDHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERM-KHEKII 1699
            :..|||..||:.....|:.||:.||    .|.|.::||||||||:|..:.::..|:.: .|..:.
 Worm   427 WKEWPDWQVPESSEVMLKILRKIRA----RSTPPVIHCSAGVGRSGTLMAVEIALQSIHTHFTLP 487

  Fly  1700 DIYGHVTCLRAQ-RNYMVQTEDQYIFIHDAILEAIIC--GVTEVPARNLHTHLQKLL 1753
            ||...|:.||.. |...|||..||:.|...:|:..:.  .:||..|...::..::.|
 Worm   488 DIKQIVSHLRVTGRAASVQTLQQYMLIWKVLLDFGVAYKQITEELAEKFNSTYRRSL 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 85/246 (35%)
R-PTP-LAR-2 1784..2021 CDD:350402
M04G7.2NP_499934.1 PTZ00108 <9..242 CDD:240271 41/195 (21%)
PTPc 266..520 CDD:214550 89/263 (34%)
Blue background indicates that the domain is not in the aligned region.

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