DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and C55B7.3

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:NP_001367695.1 Gene:C55B7.3 / 172359 WormBaseID:WBGene00016942 Length:346 Species:Caenorhabditis elegans


Alignment Length:326 Identity:96/326 - (29%)
Similarity:153/326 - (46%) Gaps:56/326 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1463 ANHIERLKSNDNQKFSQEYESIEPGQQFTWDNSNLEHNKSKNRYANVTAYDHSRVQLPAVEGVVG 1527
            |..:...:.||.:|.....|:.|.|               ||||.:|...|::||:|   ||...
 Worm    58 AEFVGMRRFNDFEKMKAFKEAQEAG---------------KNRYKDVGCLDNNRVKL---EGPWP 104

  Fly  1528 SDYINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWPTR 1592
            .:||:|||.........::.||.||::|..|||.||::.|...|.|:..|.|:...||.:|:|::
 Worm   105 HEYIHANYVATPTNPKRFICTQAPLEKTCADFWYMCYQDKVEYIFMLCNLLEKGARKCFEYFPSK 169

  Fly  1593 -----GTETYGQIFVTITETQELATYSIRT--------FQLCRQGFNDR-REIKQLQFTAWPDHG 1643
                 ..|..||......|:.  .|||.|:        .::..:|..:: |:.....:..|||.|
 Worm   170 KGDVMDFEEGGQKISVKCESS--VTYSFRSDAKANVTATEIVIEGPGEKTRKTTHYHWNDWPDRG 232

  Fly  1644 VPDHPAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTC- 1707
            ||......|:.|...|    |..||::||||||:||||..::::.:::::...:|||....:.. 
 Worm   233 VPAADMAVLELLENAR----PSKGPIVVHCSAGIGRTGSVVMLEYIMDQLLAGQIIDDGEKILVK 293

  Fly  1708 LRAQRNYMVQTEDQYIFIHDAILEAIICGVTEVPARNLHTHLQKLLITEPG--ETISGMEVEFKK 1770
            :|.|||..:||:.||:|:|..|               |:...:|.|:.|.|  |.......::||
 Worm   294 IREQRNNSIQTDAQYLFVHQVI---------------LNYFRKKKLMEETGVQEAYDAFLEQYKK 343

  Fly  1771 L 1771
            :
 Worm   344 V 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 81/251 (32%)
R-PTP-LAR-2 1784..2021 CDD:350402
C55B7.3NP_001367695.1 Y_phosphatase 83..317 CDD:459674 81/257 (32%)
Blue background indicates that the domain is not in the aligned region.

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