Sequence 1: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001345522.1 | Gene: | Lifr / 16880 | MGIID: | 96788 | Length: | 1092 | Species: | Mus musculus |
Alignment Length: | 1165 | Identity: | 213/1165 - (18%) |
---|---|---|---|
Similarity: | 377/1165 - (32%) | Gaps: | 419/1165 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 168 TPNIYWIKNQ-TKVDMSNPRYSLKDGFLQIE----NSREEDQGKYECVAENSMGTEHSKATNLYV 227
Fly 228 KVRRVPPTF--SRPPETISEVMLGSNLNLSCIAVGSPMPHVKWMKGSEDLTPENEMPIGRNVLQL 290
Fly 291 INIQESANYTCIAASTLGQIDSVSVVKVQSLPTAPTDVQIS-EVTATSVRLEWSYKG---PEDLQ 351
Fly 352 YYVIQYKPKNANQAFSEISGIITMYYVVRAL-SPYTEYEFYVIAVNNIGRGPPSA---------P 406
Fly 407 ATCTTGDFS---------FGGTKMES--AP-------RNVQVR-------TLSSSTMVI-TWEPP 445
Fly 446 ETPNGQV---------------------------TGYKVYYTTNSN----------QPE------ 467
Fly 468 ----------ASWNSQMVD------NSELTTVSELTP-----HAI-------YTVRVQA------ 498
Fly 499 --YTSMGAGPMSTPVQVKAQQGV---------PSQPSNFRATDIGETAVTLQWTKPTHSSE-NIV 551
Fly 552 HYELYWNDTYANQAHHKRISNSEAYT----LDGLYPDTLY---------YIWLAAR-SQRGEGAT 602
Fly 603 TPPIPVR----TKQYGAPPRNITAIATSSTTISLSWLPPPVERSNGRIIYYKVFFVEVGREDDEA 663
Fly 664 TTMTLN-MTSIVLD----------ELKRWTEYKIWVLAGTSVGDGPRSHPIILRTQEDVPGDPQD 717
Fly 718 VKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELRDEGKGFLNEPFKFD-----------VV 771
Fly 772 DTLEFNVTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVRPTVSLKIMEREPIV----- 831
Fly 832 -------SIELEWER-PAQTY-GELRGYRLRW--GVKD-----------QALKEEMLSGPQMTKK 874
Fly 875 RFDNLERGVEYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITIRFQTP-----------DV 928
Fly 929 LCV---TW-------DPPTREHRNGIITRYDVQFHKKIDHGLGSERNMTLRKAVFTNLE------ 977
Fly 978 -----ENTEYIFRV--RAYTKQGAGPFSDKL------IVETE------RDMGRAPMSL------- 1016
Fly 1017 -QAEATSEQTAEIWWEPVTSRGKLLGYKIFYTM---TAVED--LDDWQTKTVGLTESADL 1070 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | 12/63 (19%) | ||
Ig | 159..228 | CDD:299845 | 12/64 (19%) | ||
I-set | 234..318 | CDD:254352 | 10/85 (12%) | ||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | 6/67 (9%) | ||
fn3 | 324..404 | CDD:278470 | 16/84 (19%) | ||
FN3 | 423..514 | CDD:238020 | 28/186 (15%) | ||
FN3 | 520..610 | CDD:238020 | 24/108 (22%) | ||
FN3 | 616..707 | CDD:238020 | 23/101 (23%) | ||
FN3 | 712..810 | CDD:238020 | 15/108 (14%) | ||
FN3 | 832..907 | CDD:238020 | 19/89 (21%) | ||
FN3 | 914..1005 | CDD:238020 | 22/130 (17%) | ||
FN3 | 1012..1101 | CDD:238020 | 18/72 (25%) | ||
fn3 | 1106..1198 | CDD:278470 | |||
PTPc | 1476..1731 | CDD:214550 | |||
PTPc | 1503..1731 | CDD:238006 | |||
PTPc | 1763..2022 | CDD:214550 | |||
PTPc | 1791..2022 | CDD:238006 | |||
Lifr | NP_001345522.1 | LIFR_N | 50..124 | CDD:375634 | 15/119 (13%) |
LIFR_D2 | 126..239 | CDD:375455 | 28/142 (20%) | ||
FN3 | 428..525 | CDD:238020 | 21/96 (22%) | ||
WSXWS motif | 514..518 | 1/3 (33%) | |||
FN3 | 547..613 | CDD:389787 | 21/92 (23%) | ||
FN3 | 724..816 | CDD:238020 | 17/91 (19%) | ||
Box 1 motif | 864..872 | 2/7 (29%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1009..1092 | 7/21 (33%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |