DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and Ptp52F

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:XP_061510830.1 Gene:Ptp52F / 1280988 VectorBaseID:AGAMI1_010367 Length:1478 Species:Anopheles gambiae


Alignment Length:1661 Identity:357/1661 - (21%)
Similarity:588/1661 - (35%) Gaps:494/1661 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 GRNVLQLINIQESA-NYTCIAASTLGQIDSVSVVKVQSLPTAPTDVQISEVTATSVRLEWSYKGP 347
            ||:|   .|.:.|| ..:.:.:.|...::.:. :::......|.::.||. :..:|. |||.:..
Mosquito    24 GRDV---YNDENSALRLSALPSQTFNDLNELD-LRISHCRLKPLNITISR-SVVNVE-EWSDERD 82

  Fly   348 EDLQYYV-IQYKPKNANQAFSEISGIITMYYVVRALSPYTEYEFYVIAVNNIGRGPPSAPATCTT 411
            :::.|:: :|:...||..:.:.    :|.:.:.....|..:                    .|:.
Mosquito    83 DNVFYHLEVQWIQPNATVSTAN----LTAWLMQNIALPVRD--------------------QCSL 123

  Fly   412 GDFSFGGTKMESAPRNVQVRTLSSSTMVIT---WEPPETPNGQVTGYKVYYTTNSNQPEA-SW-- 470
                   .|:::..|:::       |.|..   |||   ..|::|..:|....|.|...| :|  
Mosquito   124 -------LKLKACQRDLR-------TPVCVCGEWEP---QCGKITDIEVMEVGNDNPTYALTWKV 171

  Fly   471 -NSQMVDNSELTTVSELTPHAI-------------YTVRVQAYTSMGAGP--------MSTPVQ- 512
             :...|...||...|.:.|..|             |.| |.....:.||.        :.:||: 
Mosquito   172 EDQACVHRYELLVGSSVIPLDIPFVGMSGLQGGKKYRV-VLKIICINAGKVQHLLEIYVKSPVKQ 235

  Fly   513 -------------VKAQQG----VPSQPSNFRATDIGETAVTLQ----------WTKPTHSSENI 550
                         |:.:.|    :...|..|:...|.....|.:          :...||...::
Mosquito   236 TTPNPWRCGLEFYVQHRNGIGEVINDNPKTFQFYHIARPITTRKVCSKEARKESYKTKTHGKLSV 300

  Fly   551 VHYELYWN-------------DTYANQAHHKRISNSEAYTLDGLYPDTLYYIWLAARSQRGEGAT 602
            .......|             |.:|..:|.:..||:....|..:.|   ....|.|||..|:...
Mosquito   301 SDTNFQPNRVPVDVSTPQLPLDYFAKTSHIELPSNAIPKVLSAIPP---LCPGLRARSSSGDAII 362

  Fly   603 TPPIPVRTKQYGAPPRNITAIATSSTTISLSWLPPPVERSNGRIIYYKVFFVEVGREDDEATTMT 667
            .|       |...|.|::.|......::.|||.||    ..|.:. .|.:.:   ....|:.|:.
Mosquito   363 KP-------QTVGPVRDLRANTDLDRSVLLSWRPP----KEGAVC-VKEYLI---TWSSESATID 412

  Fly   668 LNMTSIVLDELKRWTEYKIWVLAGTSVGDGPRSHPIILRTQEDVPGDPQDVKAT----------- 721
            .:.|...:..|:....|:..|.|.....|               .|.|:.:.||           
Mosquito   413 ASRTVYNVTNLEPCMTYEFTVNAIDHTND---------------KGTPESISATVRELQQLSQVT 462

  Fly   722 --PLNST---SIHVSWKPPLEKDRNG--IIRGYHIHAQELRDEGKGFLNEPFKFDVVDTLEFNVT 779
              .||..   |:.|.||||    .||  .:..|.:.|         :.|.|.....|..:..|.|
Mosquito   463 ELELNEVEPRSLSVKWKPP----TNGTFCVESYRVVA---------WYNNPANSADVTEVFSNTT 514

  Fly   780 GLQPDT--------KYSIQVAALT-RKGDGDRSAAIVVKTPGGVPVRPTVSLKIMER-------E 828
            ..|..|        .|::||..:: .|.||               :....::|..||       |
Mosquito   515 TDQHVTFGEVIACMSYTVQVIPISISKHDG---------------LNEIGTIKTKERTILFYHVE 564

  Fly   829 PIVSIEL---EWERPAQTYGE-----------LRGYRLRWGV---KDQALKEEMLSGPQMTKKRF 876
            ||.:|.|   ..|.....:.|           ....::..||   :.|.:||.::.....|   |
Mosquito   565 PIRAIALSSRSLELSTMLHSENNNNCLLVTVAFNCTKMVEGVPVPESQVIKEFVIPNGNTT---F 626

  Fly   877 DNLERGVE-------YEFRVAGSNHIGIGQET-VKIFQTPEGTPGGPPSNITIRFQTPDV----- 928
            :.:   ||       ||......|..|....| ...|.|.|..|           ::|.|     
Mosquito   627 EGI---VEPLVPYSTYECNAKIQNIAGWSDPTPAYTFVTAEDVP-----------ESPSVIELIG 677

  Fly   929 ----LCVTWDPPTREHRNGIITRYDV-------------------QFHKKIDHGLGSERNMTLRK 970
                :.:.|..||  .:||::.||.:                   :|::.:|  |..|.|....:
Mosquito   678 KNRSIGIIWKAPT--VKNGVVVRYRIHVRMVAPEYPLPKLCAPLEEFNETVD--LRDEVNPDESR 738

  Fly   971 A--------VFTNLEENTEYIFRVRAYTKQGAGPFSDKLIVETERDMGRAPMSLQ------AEAT 1021
            :        |...|...|.|:.:|.|.|..|.||:::.:.|.|..|:.....|.:      .|..
Mosquito   739 SWDGIEFEHVVAKLNPYTLYLVQVAAATGAGFGPYTEPVEVVTLPDVSNVTASFRIDKIEGPELN 803

  Fly  1022 SEQTAEIW--WE-PVTSRGKLLGYKIFY-TMTAVEDLD-------DWQTKTVGLTESADLVNLEK 1075
            ....:.:|  |: |....|:|   |.|. .|..:.:.|       .|:   |.:.|..:::::..
Mosquito   804 QTYKSSVWFGWDLPCGLNGRL---KRFVGEMYGIREQDPSNPHALTWE---VNVGEEEEILDVYS 862

  Fly  1076 FAQ--------YAVAIAARFKNGLGRLSEKVTVRIK-PEDVPLNLRAHDVSTHSMTLSWSPPIRL 1131
            :.:        |.|||..... .:..||::|.|:.: |..:|                       
Mosquito   863 YVEDRLKPEYNYTVAIRVEVV-AVEELSDEVKVQFESPAGIP----------------------- 903

  Fly  1132 TPVNYKISFDAMKVFVDSQGFSQTQIVPKREIILKHYVKTHTINELSPFTTYNVNVSAIPSDYSY 1196
                   |.|..:.:.:...|..........|:|.:...|..|..:....               
Mosquito   904 -------SIDQKEEWFNVDVFEAPNPTNTARIMLGNITLTSDIGSIRYMA--------------- 946

  Fly  1197 RPPTKITVTTQMAAPQPMVKPDFYGVVNGEEILVILPQASEEYGPISHYYLVVVPEDKSNLHKIP 1261
                 :.|:.::..|.|..:.||.....|           .::..:..:||       :|..:..
Mosquito   947 -----LLVSERLCQPDPTPRTDFINSTGG-----------TQWPSVPDWYL-------ANEKRCA 988

  Fly  1262 DQFLT-----DDLLPG-RNKPERPNA---PYIAAKFPQRSIPFTFHLGSGDDYHNFTNRKLEREK 1317
            :|:.|     :.:..| |...:|..|   .|:..|            ...|....:.|..|:...
Mosquito   989 EQYQTTPKFWNPMARGQRATTDREAAGLIEYVIGK------------EDCDRGQEYCNGPLKPGT 1041

  Fly  1318 RYRIFVRAVVDTPQKHLYTSSPFSEFLSLDMREAPPGERPHRPDPNWPAEPEVSVNRNKDEPEIL 1382
            .|.:.||..    .:..||.|....|.:                     :..:.|..      |:
Mosquito  1042 EYALIVRIF----SRSGYTDSEMQVFRT---------------------DSLIKVGL------IV 1075

  Fly  1383 WVVLPLMVSTFIVSTALIVLCVVKRRRQPCKTPDQAAVTRPLMAADLGAGPTPSDPVDMRRLNFQ 1447
            ..||..:|..|:..     |.||.|::            |.|:.|....|....:|.|       
Mosquito  1076 SAVLACLVLAFLGG-----LFVVWRKQ------------RLLLPAQQTRGAPTEEPAD------- 1116

  Fly  1448 TPGMISHPPIPISEFANHIERLKSNDNQKFSQEYESIEPGQQFTWDNS----NLEHNKSKNRYAN 1508
                     ||:..|.:..:.|..::.:|.|:|:::|.....|...::    :...|:.||||.|
Mosquito  1117 ---------IPVKNFPHQYDELFQSNREKVSKEFQAINYFSDFALQDTVSFQSARENERKNRYVN 1172

  Fly  1509 VTAYDHSRVQLPA----VEGVVG-SDYINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKT 1568
            :..||.:||.|.:    .||..| :|||||::.:||:....|:|||||.|||..|||||..:.:.
Mosquito  1173 ILPYDSNRVLLDSNEDGEEGEYGANDYINASFIEGYKYQREYIATQGPKQETCADFWRMVLQYEI 1237

  Fly  1569 ATIVMMTRLEERTRIKCDQYWPTRGTET-YGQIFVTITETQELATYSIRTFQLCRQGFNDRREIK 1632
            .:|||:|:..:..:.||.||:|.....| ||.|.|..|:...|:.|..|.| |..:| |..:.:.
Mosquito  1238 ESIVMLTQPIDHDKNKCCQYFPRFDQYTDYGDIRVKCTQELNLSLYYKRLF-LVSKG-NLTKAVF 1300

  Fly  1633 QLQFTAWPDHGVPDHPAPFLQFLRRCRALTPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEK 1697
            ...|..||||..|...|..::|.:..||.....:.|::|||||||||||.:|.:|.:|:|::.||
Mosquito  1301 HYHFLEWPDHSCPASTADLIKFSKIVRAERKSYAIPLVVHCSAGVGRTGTFIALDIVLQRLQQEK 1365

  Fly  1698 IIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAILEAI 1733
            .|::|..|..||.||..||||.|||.|::...:|.:
Mosquito  1366 KINVYDTVKQLRRQRVKMVQTLDQYTFLYQCCMEYV 1401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401 7/35 (20%)
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401 1/4 (25%)
Ig strand F 298..305 CDD:409401 0/6 (0%)
Ig strand G 309..318 CDD:409401 0/8 (0%)
FN3 322..411 CDD:238020 14/89 (16%)
FN3 <382..747 CDD:442628 84/451 (19%)
FN3 712..810 CDD:238020 29/124 (23%)
FN3 832..898 CDD:214495 17/89 (19%)
FN3 <867..1269 CDD:442628 82/476 (17%)
fn3 914..998 CDD:394996 24/119 (20%)
R-PTPc-LAR-1 1498..1735 CDD:350401 101/242 (42%)
R-PTP-LAR-2 1784..2021 CDD:350402
Ptp52FXP_061510830.1 None
Blue background indicates that the domain is not in the aligned region.

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