DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lar and Ptp36E

DIOPT Version :10

Sequence 1:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster
Sequence 2:XP_061517629.1 Gene:Ptp36E / 1277872 VectorBaseID:AGAMI1_001392 Length:682 Species:Anopheles gambiae


Alignment Length:660 Identity:192/660 - (29%)
Similarity:324/660 - (49%) Gaps:59/660 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1407 RRRQPCKTPDQAAVTRPLMAADLGAGPTPSDPVDMRRLNFQTPGMISHP--PIPISEFANHIERL 1469
            ::::...:....::...:..:.|.:|....|.|.:...:.:.|...:.|  |..:..||...|: 
Mosquito    28 KKKKTLSSTSLVSIPNTIKLSMLNSGLLSLDKVKLSARDEKNPLSQTMPDKPTELRHFAKLCEQ- 91

  Fly  1470 KSNDNQKFSQEYESIEPGQQFTWDNSNLEH-----NKSKNRYANVTAYDHSRVQLPAVEGVVGSD 1529
                .:||...|: :|.......:.::.:|     |..||:......||::||.|...:....||
Mosquito    92 ----RRKFPILYK-LEFQTAVKVETNSCKHALRKANALKNQNPKCIPYDYNRVVLDKYDNTPDSD 151

  Fly  1530 YINANYCDGYRKHNAYVATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWP--TR 1592
            ||||:|.|...|.|||:.||||.::|.:|||||.|:...:.|||:|:..:.|::.|.||||  ..
Mosquito   152 YINASYVDSLLKPNAYIVTQGPTEDTVLDFWRMVWQENCSCIVMLTKTFDFTKVMCVQYWPPNKE 216

  Fly  1593 GTETYGQIFVTITETQELATYSIRTFQLCRQG----FNDRREIKQLQFTAWPDHGVPDHPAPFLQ 1653
            ..|.||.:.:||...:|||.:.||||:|.:..    .::.|.:.|..:|.|..|..|...| .|:
Mosquito   217 KEEIYGDMHITIQSEEELANFHIRTFRLFKLNKDNVVSEERFLLQFHYTEWHSHTCPFSNA-ILE 280

  Fly  1654 FLRRCRAL------TPPESGPVIVHCSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQR 1712
            |.||.||:      .....||::|||:.|.||:|.|:.||:.:|..:.|....::|::..||..|
Mosquito   281 FRRRVRAVVGTIIKANSRIGPMLVHCNDGGGRSGVYLAIDANMELAEEEDSFHVFGYLKKLRQSR 345

  Fly  1713 NYMVQTEDQYIFIHDAILEAIICGVTEVPARNLHTHLQKLLITEPGETISGMEVEFKKLSNVKMD 1777
            ..:::..|||.|::|.:.|.||||.:..|.:.|...|::..:.:|...::..:.|:.::..   .
Mosquito   346 KGLIENVDQYKFVYDTLEEFIICGNSWFPVKELSQRLKEKSLKDPLTKMNSYQREYAQICK---Q 407

  Fly  1778 SSKFVTANLPC-------NKHKNRLVHILPYESSRVYLTPIHGIEGSDYVNASFIDGYRYRSAYI 1835
            :.:|...:  |       |:.|||.|..:|.::.|.||:...|...:||:||.|:|||.....||
Mosquito   408 TPRFTIGD--CAGGHRGDNREKNRDVLCVPPDNFRPYLSSFQGNSFTDYINAVFVDGYTKPREYI 470

  Fly  1836 AAQGPVQDAAEDFWRMLWEHNSTIVVMLTKLKEMGREKCFQY---WPHER-SVRY-QYYVVDPIA 1895
            ..:.|:|....:||.::::|....||:|.:.....:    ||   ||..| |.:| ..:.:|.|:
Mosquito   471 VTEWPLQKTCGEFWSLVYDHECAAVVVLCQPPHNSQ----QYPAFWPEGRHSKKYGPVFTIDHIS 531

  Fly  1896 EYNMPQYKLREFKV-------TDARDG---SSRTVRQFQFIDWP-EQGVPKSGEGFIDFIGQVHK 1949
            ..:....|...|::       |:...|   ..|||:.||...|| ...||.|....::.:..|.:
Mosquito   532 HQHYSNIKSWIFRINKKVISLTELMAGVKAPPRTVQLFQLTCWPMGHKVPTSTNSLVELMNMVER 596

  Fly  1950 TKEQFGQDGPITVHCSAGVGRSGVFITLSIVLERMQYEGVLDVFQTVRILRSQRPAMVQTEDQYH 2014
            .:::... ||:.|....|..|:||:...:..:|::...|.:||||.|:.:|..||.:|....:|.
Mosquito   597 WRQKTDY-GPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVDNMTEYK 660

  Fly  2015 FCYRAALEYL 2024
            :||...|.|:
Mosquito   661 YCYDLVLHYV 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 93/253 (37%)
R-PTP-LAR-2 1784..2021 CDD:350402 74/259 (29%)
Ptp36EXP_061517629.1 None
Blue background indicates that the domain is not in the aligned region.

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