DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10366 and AT3G29340

DIOPT Version :9

Sequence 1:NP_609995.1 Gene:CG10366 / 35258 FlyBaseID:FBgn0032814 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:469 Identity:80/469 - (17%)
Similarity:122/469 - (26%) Gaps:226/469 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 SLDGSSPSTEKAGEDA----ADSEKRHQCNECLRSYATSKTLQRHLR-----------QDHGQTE 267
            |..|...||..:|..|    ..|:..|:|..|.:|:...:.|..|.|           |:..:..
plant    17 SQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVY 81

  Fly   268 PTTEQLQ-----------CPDCPKKFRLHYQLERHMKWHVPLPKRKQYACSSCD----------K 311
            |...:||           |..|.|.|..:..|..|.|.|   ...|:...|:.|          |
plant    82 PRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLH---RSTKRELASTQDENSLLDSSEAK 143

  Fly   312 KFATSASA---QQHEQYMHLDERPR----PVICEQCGVGVHS---MSALKEHVLKHTDY-APFEC 365
            |..:..|:   .|.|:::|..|..:    |:        .||   .|.|:..:...|.: :...|
plant   144 KIVSQPSSFKVSQEEKFLHCVELKQDFSEPL--------SHSGALPSTLRSKLQTKTQWKSSCHC 200

  Fly   366 EVCKKCFKSANRLKHHKETHD--------PHKYI------------------------------- 391
            ::|.|.|..:..|.:||..|.        ..||.                               
plant   201 KICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKIL 265

  Fly   392 -CPE-------------------CGMQLNSRTTLNRHR------------LVHTDQMQHKCDYCG 424
             |.|                   |...:..:....::.            :....|..|.|..||
plant   266 HCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCG 330

  Fly   425 REFKRAKALKNHLILHTG----------------------------------------------- 442
            |:|...|.:..|..:|:|                                               
plant   331 RKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVI 395

  Fly   443 --------------------------------LKP--------------YSCDFCDRTF----AN 457
                                            |||              |.|..|:::|    |.
plant   396 EAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQAL 460

  Fly   458 GSNCRTHKKKSHPE 471
            ||:.|.|:.|..|:
plant   461 GSHQRLHRWKLVPK 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10366NP_609995.1 zf-AD 28..108 CDD:285071
PTZ00423 131..>230 CDD:240413 4/11 (36%)
COG5048 <222..408 CDD:227381 53/291 (18%)
C2H2 Zn finger 242..263 CDD:275368 7/31 (23%)
C2H2 Zn finger 275..295 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..357 CDD:275368 14/70 (20%)
C2H2 Zn finger 365..385 CDD:275368 7/19 (37%)
C2H2 Zn finger 392..412 CDD:275368 3/50 (6%)
zf-C2H2 418..440 CDD:278523 8/21 (38%)
C2H2 Zn finger 420..440 CDD:275368 7/19 (37%)
zf-H2C2_2 432..457 CDD:290200 10/121 (8%)
C2H2 Zn finger 448..466 CDD:275368 8/21 (38%)
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:290623 7/24 (29%)
C2H2 Zn finger 45..65 CDD:275368 6/19 (32%)
C2H2 Zn finger 100..120 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I2696
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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