DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10366 and LOC568955

DIOPT Version :9

Sequence 1:NP_609995.1 Gene:CG10366 / 35258 FlyBaseID:FBgn0032814 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_697406.4 Gene:LOC568955 / 568955 -ID:- Length:541 Species:Danio rerio


Alignment Length:502 Identity:104/502 - (20%)
Similarity:160/502 - (31%) Gaps:171/502 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 FGLLDEETQT------EVHYVDKKPKLDEQLEFLPEE--SPY--------ELANPLTPEEKQESV 174
            :|..||:..:      |..:.|.:....|:.|..||.  :||        .|.:||:.....:  
Zfish    68 YGFSDEDCSSYNRLGIESDFEDPRDTESEREEMAPEAAFAPYLSCRQCGQLLGDPLSGLYCLQ-- 130

  Fly   175 DQEQDQPTEEPDEQDADYEPNE--DRVLMSLCDVYGIQEDNSSAGSLDGSSPST----------- 226
                   ..|.|.||...||..  |..|           :|.:....||::..|           
Zfish   131 -------CGETDRQDRSLEPTHPADNTL-----------ENLNHSRSDGNTSKTFSCKLCSFSSR 177

  Fly   227 ----EKAGEDAADSEKRHQCNECLRSYATSKTLQRHLRQDHGQTEPTTEQLQCPDCPKKFRLHYQ 287
                .|......:.||.:||..|:.:.|....||||:|...|:     :..:|..|.........
Zfish   178 YSNHLKRHMKTHNGEKPYQCPHCVYASAQLVNLQRHVRTHTGE-----KPYKCQFCTFACNSLGN 237

  Fly   288 LERHMKWHVPLPKRKQYACSSCDKKFATSASAQQH------------------------------ 322
            |:||.:.|.   :.|:.:|:.||.:.:.|.|.::|                              
Zfish   238 LKRHQRMHT---QEKELSCAHCDFRASNSHSLKKHTKSHKEDKTTALTEESVVSDLTLHISSDPD 299

  Fly   323 --EQYMH-------------------------------------------LD--ERPRPVICEQC 340
              :.|.|                                           ||  |...|.||.:|
Zfish   300 FLQNYDHHHNHHLPSHLPPPALLHNEGLSGESDPLPELLFPFSCRVCGAVLDDEEATAPQICSKC 364

  Fly   341 GVGVHSMSA----------------------LKEHVLKHTDYAPFECEVCKKCFKSANRLKHHKE 383
            .:.:.|.|:                      |..|:..|:...|::|..|.......:.||.|..
Zfish   365 TLDMLSKSSPDKDDKLFPCTSCPFVTQYPNHLARHMKTHSGEKPYKCPQCSYASAHFDNLKRHHR 429

  Fly   384 THDPHK-YICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYS 447
            .|...| |.|..|.....:...|.||..:|:.....:|..|.....::..||.|::.|||.||:.
Zfish   430 VHTGEKPYKCRVCDYACGNLANLKRHERIHSGSKPFQCSVCSYSCNQSMNLKRHMLRHTGEKPFK 494

  Fly   448 CDFCDRTFANGSNCRTHKKK-SHPEELAAQEAAGGGRSHNRNIPKLE 493
            |..|..|..:..|.:.|:|| .|         |||.......:|:.|
Zfish   495 CQHCGYTTGHWDNYKRHQKKHGH---------AGGEGWIKMQLPEKE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10366NP_609995.1 zf-AD 28..108 CDD:285071
PTZ00423 131..>230 CDD:240413 25/131 (19%)
COG5048 <222..408 CDD:227381 53/300 (18%)
C2H2 Zn finger 242..263 CDD:275368 8/20 (40%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
C2H2 Zn finger 306..357 CDD:275368 19/149 (13%)
C2H2 Zn finger 365..385 CDD:275368 5/19 (26%)
C2H2 Zn finger 392..412 CDD:275368 5/19 (26%)
zf-C2H2 418..440 CDD:278523 5/21 (24%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
zf-H2C2_2 432..457 CDD:290200 11/24 (46%)
C2H2 Zn finger 448..466 CDD:275368 5/17 (29%)
LOC568955XP_697406.4 C2H2 Zn finger 169..189 CDD:275368 1/19 (5%)
zf-H2C2_2 181..206 CDD:290200 6/24 (25%)
COG5048 193..>467 CDD:227381 53/281 (19%)
C2H2 Zn finger 197..217 CDD:275368 8/19 (42%)
zf-H2C2_2 209..234 CDD:290200 8/29 (28%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 383..403 CDD:275368 2/19 (11%)
zf-H2C2_2 395..420 CDD:290200 6/24 (25%)
C2H2 Zn finger 411..431 CDD:275368 5/19 (26%)
zf-H2C2_2 423..446 CDD:290200 8/22 (36%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
zf-H2C2_2 451..476 CDD:290200 6/24 (25%)
C2H2 Zn finger 467..487 CDD:275368 5/19 (26%)
zf-H2C2_2 479..502 CDD:290200 10/22 (45%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.