DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10366 and Zfp407

DIOPT Version :9

Sequence 1:NP_609995.1 Gene:CG10366 / 35258 FlyBaseID:FBgn0032814 Length:578 Species:Drosophila melanogaster
Sequence 2:XP_008770443.2 Gene:Zfp407 / 307213 RGDID:1310645 Length:2255 Species:Rattus norvegicus


Alignment Length:563 Identity:129/563 - (22%)
Similarity:206/563 - (36%) Gaps:151/563 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 CSECLSLVTSLVNFSERI-----TRVQKLYCILQSTPSQERPNLHELRSKFGLLDEETQTEVHYV 140
            |.:|..|...|...:..|     |:.:..:|:|.........|||:..:..|          |..
  Rat  1405 CDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAG----------HMR 1459

  Fly   141 DKKPKLDEQLEFLPEESP----YELANPLTPEE--------KQESVDQEQDQPTEEPDEQ-DADY 192
            :::..::|    |||...    .:...|...|:        :.|.:.:|.::...|..|| :.:.
  Rat  1460 NEQASVEE----LPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINRER 1520

  Fly   193 EPNEDRVLMSLCDVYG--IQEDNSSA-----GSLDGSSP--------STEKAGEDAADSEKRH-- 240
            |.|:..|    |...|  .:..||.|     .:..||.|        :|.:.| ||.:..|||  
  Rat  1521 EENQGNV----CKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLG-DARNHVKRHLG 1580

  Fly   241 ----QCNECLRSYATSKTLQRHLRQDHGQTEPTTEQLQCPDCPKKFRLHYQLERHMKWHVPLPKR 301
                :|:.|..::...|.|..||...||                               |..||.
  Rat  1581 MREYKCHVCGVAFVMKKHLNTHLLGKHG-------------------------------VGTPKE 1614

  Fly   302 KQYACSSCDKKFATSASAQQHEQYMHLDERPRPVICEQCGVGVHSMSALKEHVLKHTDYAPFECE 366
            :::.|..||:.|....:...|.: :|..|:|.......|.....:.||:|:|...||....|.|:
  Rat  1615 RKFTCHLCDRSFTEKWALNNHVK-LHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCD 1678

  Fly   367 VCKKCFKSANRLKHHKETHDPHK-YICPECGMQLNSRTTLNRHRLVHTDQMQHKCDYCGREFKRA 430
            :|.....:.:.|..|:..|...| :.|.||.....:::.|.||:.|||.:..::|.:|......|
  Rat  1679 LCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCA 1743

  Fly   431 KALKNHLILHT----GLKPYSCDFCDRTFANGSNC----RTHKKKSHPEELAAQEAAGGGRSHNR 487
            :.::.| ||||    |:|.|:|..||    .|:|.    |.|.|:.||:            ..|.
  Rat  1744 ENIRKH-ILHTGKHEGVKMYNCPKCD----YGTNVPVEFRNHLKEQHPD------------IENP 1791

  Fly   488 NIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPRPATKDTP---------------------- 530
            ::..|.|.|......| :..:.:|...|...|:.......|:|                      
  Rat  1792 DLAYLHAGKQAELPSD-VQGIVSKSYECRLKGQGATFVETDSPFTAATLAEESPVKEKSLRSSKR 1855

  Fly   531 -ASNP------AVIQDAQPEPAPDPGGENATQADTPAAAIPTL 566
             ||:|      .:||....|.|.|     |:..:|.||.:.||
  Rat  1856 QASSPEQVQQVIIIQGYDGEFALD-----ASVEETAAATLQTL 1893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10366NP_609995.1 zf-AD 28..108 CDD:285071 7/31 (23%)
PTZ00423 131..>230 CDD:240413 24/126 (19%)
COG5048 <222..408 CDD:227381 46/200 (23%)
C2H2 Zn finger 242..263 CDD:275368 6/20 (30%)
C2H2 Zn finger 275..295 CDD:275368 0/19 (0%)
C2H2 Zn finger 306..357 CDD:275368 13/50 (26%)
C2H2 Zn finger 365..385 CDD:275368 4/19 (21%)
C2H2 Zn finger 392..412 CDD:275368 6/19 (32%)
zf-C2H2 418..440 CDD:278523 5/21 (24%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
zf-H2C2_2 432..457 CDD:290200 11/28 (39%)
C2H2 Zn finger 448..466 CDD:275368 7/21 (33%)
Zfp407XP_008770443.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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