DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10366 and sdz-12

DIOPT Version :9

Sequence 1:NP_609995.1 Gene:CG10366 / 35258 FlyBaseID:FBgn0032814 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_494634.1 Gene:sdz-12 / 184388 WormBaseID:WBGene00017406 Length:330 Species:Caenorhabditis elegans


Alignment Length:335 Identity:73/335 - (21%)
Similarity:115/335 - (34%) Gaps:101/335 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 MSLCDVYGIQEDNSSAGSLDGSSPSTEKAGEDAADSEKRHQCNECLRSYATSKTLQRHLRQDH-- 263
            |||..:..:....:::.:||             .||.|..||..|.|.:|..|||:.|::  |  
 Worm     1 MSLSSLDAVLSLIATSSTLD-------------QDSAKVPQCQVCKRKFANQKTLRTHMK--HIT 50

  Fly   264 ---GQTEPTTEQLQCPDCPKKFRLHYQLERHMKWHVPLPKRKQYACSSCDKKFATSASAQQHEQY 325
               |::.....:.:|.:|.|:|.....|:||...|.....:|   ||:|.:.|......|:| .:
 Worm    51 CRPGRSNVVNHKFRCENCEKQFTNKPNLKRHQITHSGSKSKK---CSTCQRTFFREDQLQRH-LH 111

  Fly   326 MHLDERPR---PVICEQCGVGVHSMSALKEHVLKHTDYAPFECEVCKKCFKSANRLKH------- 380
            .||.||..   ||:  .|.:.......::.|::.|..::..|...|.||.|.....:|       
 Worm   112 NHLKERSHFDCPVL--NCSMQFVFYEGVENHLVNHHHFSYSESAPCGKCHKLFGSPRHLLVHYHF 174

  Fly   381 -HKE----------------------THDPHKYIC------PECGMQLNSRTT--------LNRH 408
             |||                      :..|...:.      |...:.:|..|:        .|..
 Worm   175 DHKEALRSSAPAPTSSARLSPITVSTSGSPRAQLAISPQEKPPQKLSINLGTSPMIEEFCEQNSA 239

  Fly   409 RLVHTDQM----------------------QHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFC 451
            .|.:|||.                      ..:|.:|..:|..|.....|..||....|:.|..|
 Worm   240 TLPNTDQQLSPTLSPNEPRFRNLITSEPTPSFECKHCTIKFHDATMSIMHNALHAPGSPFKCAIC 304

  Fly   452 DRTFANGSNC 461
                  |:.|
 Worm   305 ------GAEC 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10366NP_609995.1 zf-AD 28..108 CDD:285071
PTZ00423 131..>230 CDD:240413 5/28 (18%)
COG5048 <222..408 CDD:227381 52/237 (22%)
C2H2 Zn finger 242..263 CDD:275368 8/20 (40%)
C2H2 Zn finger 275..295 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..357 CDD:275368 14/53 (26%)
C2H2 Zn finger 365..385 CDD:275368 8/49 (16%)
C2H2 Zn finger 392..412 CDD:275368 5/33 (15%)
zf-C2H2 418..440 CDD:278523 5/21 (24%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
zf-H2C2_2 432..457 CDD:290200 6/24 (25%)
C2H2 Zn finger 448..466 CDD:275368 4/14 (29%)
sdz-12NP_494634.1 SFP1 <25..86 CDD:227516 19/62 (31%)
C2H2 Zn finger 29..48 CDD:275368 8/20 (40%)
COG5236 <32..>197 CDD:227561 42/172 (24%)
C2H2 Zn finger 65..85 CDD:275368 7/19 (37%)
C2H2 Zn finger 93..113 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4961
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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