DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10366 and row-1

DIOPT Version :9

Sequence 1:NP_609995.1 Gene:CG10366 / 35258 FlyBaseID:FBgn0032814 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001122473.1 Gene:row-1 / 172928 WormBaseID:WBGene00009508 Length:584 Species:Caenorhabditis elegans


Alignment Length:570 Identity:118/570 - (20%)
Similarity:178/570 - (31%) Gaps:193/570 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RGEELPETICSECLSL-VTSLVNFSERITR-----VQKLYCILQSTP------SQER-------- 116
            ||.|:|..|.:...|| .|:::...:.:.:     :::.:..:.|||      |.:|        
 Worm    71 RGNEIPTGIRNSRPSLPATAILQNPQFLVQLAAKGLKRPFSSVHSTPAVVPSTSIQRTRNNQNAG 135

  Fly   117 --PNLHELRSKFGLLD--EETQTEVHYVDKKPKLDEQLEFLPEE------SPYELAN-------- 163
              ||:::....|...:  |.::....|..||.:......:.|.:      |..|:.|        
 Worm   136 NTPNIYKGHYMFEATESYEPSRRSSRYNTKKIEGKFMCSYNPTKCYKLCGSVVEVINHIWAHVIH 200

  Fly   164 --PLTPEEKQESVDQEQDQPTEEPDEQDADYEPNEDRVLMSLCDVYGIQEDNSSAGSLDGSSPST 226
              ||.|.||:||.|.                            .::.....||.|..|       
 Worm   201 DPPLPPIEKKESKDD----------------------------GMFSCLLRNSDAAQL------- 230

  Fly   227 EKAGEDAADSEKRHQ----CNECLRS--YATSKTLQRHLRQDHGQTEPTTEQLQCPDCPKKFRLH 285
               .|::|.|.||.|    ||...|:  ..|...::.|:.|||..|       .|..|...|...
 Worm   231 ---AENSALSLKRLQTCQFCNAVFRTVHLKTIHVVKCHMEQDHLDT-------TCNICELDFGNS 285

  Fly   286 YQLERHMKWHVPLPKRKQYACSSCDKKFATSASA--QQHEQYMHLDERPRPVICEQCGVGVHSMS 348
            ..|..|||.|:  .....|.|..|  |:.||..|  .||....|.:: .|.::|..|        
 Worm   286 IALNTHMKKHI--SGEAPYNCQKC--KYRTSVRAFFYQHFIEKHSND-SRTLLCPIC-------- 337

  Fly   349 ALKEHVLKHTDYAPFECEVCKKCFKSANRLKH--------HKETH--DPHKYICPECGMQLNSRT 403
                  |.|.|..|           :..|.||        |..:|  .| :..|..|.:...||.
 Worm   338 ------LHHEDLRP-----------NVRRSKHIFVREFVNHMRSHALGP-QMRCHVCALTFTSRL 384

  Fly   404 TLNRHRL-----------------VHTDQMQH-----KCDYCGREFKRA---------------K 431
            .|..||.                 ||..:.:|     |.....|.|...               |
 Worm   385 LLEAHRTNDHTMLNSLWQVIERKSVHETEREHMSKRNKIGLLQRRFFETLEGRRINDEVACAGDK 449

  Fly   432 ALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGGGRSHNRNIPKLEALK 496
            ..:...:..||...:.|: |.....||:...:|..|..             ||.|....|.|.::
 Worm   450 EREGFDLTTTGDTLFECE-CGFKSWNGNRTASHYHKCR-------------RSINDIERKREIVR 500

  Fly   497 AFTKNKDNLSPVATKQSGCFAFGKKPRPATKDTPASNPAVIQDAQPEPAP 546
            ..:..|:.|.        .||...:|.....:|..:....|...:.:|.|
 Worm   501 LGSDPKEELE--------LFAVYPQPTNTEAETEEATLRKIHLERGDPLP 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10366NP_609995.1 zf-AD 28..108 CDD:285071 8/41 (20%)
PTZ00423 131..>230 CDD:240413 20/114 (18%)
COG5048 <222..408 CDD:227381 51/203 (25%)
C2H2 Zn finger 242..263 CDD:275368 6/22 (27%)
C2H2 Zn finger 275..295 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..357 CDD:275368 13/52 (25%)
C2H2 Zn finger 365..385 CDD:275368 4/27 (15%)
C2H2 Zn finger 392..412 CDD:275368 7/36 (19%)
zf-C2H2 418..440 CDD:278523 5/41 (12%)
C2H2 Zn finger 420..440 CDD:275368 3/34 (9%)
zf-H2C2_2 432..457 CDD:290200 4/24 (17%)
C2H2 Zn finger 448..466 CDD:275368 5/17 (29%)
row-1NP_001122473.1 GAT1 <15..288 CDD:227928 54/261 (21%)
C2H2 Zn finger 244..265 CDD:275368 4/20 (20%)
C2H2 Zn finger 275..295 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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