DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCNA2 and PCNA1

DIOPT Version :9

Sequence 1:NP_609994.1 Gene:PCNA2 / 35257 FlyBaseID:FBgn0032813 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_172217.1 Gene:PCNA1 / 837249 AraportID:AT1G07370 Length:263 Species:Arabidopsis thaliana


Alignment Length:259 Identity:120/259 - (46%)
Similarity:189/259 - (72%) Gaps:5/259 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKFHCDRN 65
            |||.||.|..||||:::::|:::.....|||..|..||:||:|||:||:|.|.|:.||.:.||||
plant     1 MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRN 65

  Fly    66 VSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPK 130
            :|:|::|.::.|:||||.:||.:||||.|..:.:|..|||..:::.||:|:||:::|.:|:.||.
plant    66 LSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPD 130

  Fly   131 KDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANIQLSAGTAMD-----V 190
            .:|...:::||:||:|||:|:|...:::.|:.:.:|::|...||:|||||.|...|.:|     :
plant   131 AEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAI 195

  Fly   191 SIEVQEPVTQSFAGRYLNTFTKATPLADRVKLYLSDERPLLVEYPIEDYGHIRYYLAPKVNDPD 254
            .||::|||:.|||.||:|:|||||||:|.|.:.||.|.|::|||.:.:.|:||||||||:.:.:
plant   196 VIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEE 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCNA2NP_609994.1 pcna 1..254 CDD:273158 120/257 (47%)
PCNA1NP_172217.1 PLN00057 1..263 CDD:177688 120/259 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0592
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62193
OrthoDB 1 1.010 - - D1012066at2759
OrthoFinder 1 1.000 - - FOG0003572
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100882
Panther 1 1.100 - - O PTHR11352
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2443
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.790

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