Protein Alignment PCNA2 and Pcna

DIOPT Version :10

• Sequence 1: NP_609994.1
• Gene: PCNA2 / 35257
• FlyBaseID: FBgn0032813
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_071776.1
• Gene: Pcna / 25737
• RGDID: 3269
• Length: 261
• Species: Rattus norvegicus
• Alignment Length: 259
• Identity: 125/259 - (48%)
• Similarity: 190/259 - (73%)
• Gaps: 5/259 - (1%)

  Fly     1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKFHCDRN 65
            |.||||.|..:|||:::|||::|.:...|.|..|:.|||||:||||||.|:|.|:.|:.:.||||
  Rat     1 MFEARLIQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRN 65

  Fly    66 VSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPK 130
            :::|::|.|:.|:||||.::|.:|::|.|..:.:.|.||:..:|:.:|||:||::||.:.:.||:
  Rat    66 LAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPE 130

  Fly   131 KDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANIQLSAGTAMD-----V 190
            ::|:|.:::||.||||||||:|...:::.|:|:..|::|.|.|:||..||:||..:.:|     |
  Rat   131 QEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAV 195

  Fly   191 SIEVQEPVTQSFAGRYLNTFTKATPLADRVKLYLSDERPLLVEYPIEDYGHIRYYLAPKVNDPD 254
            |||:.|||..:||.||||.|||||||:..|.|.:|.:.||:|||.|.|.||::||||||:.|.:
  Rat   196 SIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PCNA2	NP_609994.1	beta_clamp	1..254	CDD:478224	125/257 (49%)
Pcna	NP_071776.1	pcna	1..259	CDD:273158	125/257 (49%)