DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCNA2 and PCNA

DIOPT Version :10

Sequence 1:NP_609994.1 Gene:PCNA2 / 35257 FlyBaseID:FBgn0032813 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_319407.2 Gene:PCNA / 1279643 VectorBaseID:AGAMI1_010262 Length:260 Species:Anopheles gambiae


Alignment Length:259 Identity:140/259 - (54%)
Similarity:206/259 - (79%) Gaps:5/259 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKFHCDRN 65
            |.||||:.:.:|||::||:|:::.:.|.|||::|::||:|||||||||:|||.||.|:|:.||||
Mosquito     1 MFEARLNASHVLKKVLDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLSLRSDGFDKYRCDRN 65

  Fly    66 VSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPK 130
            :|:|::|.::.|::||||:||.:|:||.|..:.:|..|||..:|:.:|||:||:||||:|:.||:
Mosquito    66 LSMGMNLANMAKIMKCANNDDTLTMKAQDNADTVTFMFESQNQEKVSDYEMKLMNLDQEHLGIPE 130

  Fly   131 KDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANIQLSAGTAMD-----V 190
            .||.|.:::|:.||||||||:|.|.||:.|:|:.:|::|.|.||.|:|||:|:..:.:|     |
Mosquito   131 TDYACVVRMPAMEFARICRDLSQFGESVVISCTKEGVKFSASGDAGSANIKLAQTSTVDKEDESV 195

  Fly   191 SIEVQEPVTQSFAGRYLNTFTKATPLADRVKLYLSDERPLLVEYPIEDYGHIRYYLAPKVNDPD 254
            .||:|||||.:||.||||:|||||||.::|:|.:|.:.||:|||.|.|.||||||||||:.|.:
Mosquito   196 IIEMQEPVTLTFACRYLNSFTKATPLCNQVQLSMSADVPLVVEYRIPDLGHIRYYLAPKIEDDE 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCNA2NP_609994.1 beta_clamp 1..254 CDD:478224 140/257 (54%)
PCNAXP_319407.2 pcna 1..259 CDD:273158 140/257 (54%)

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