DRSC/TRiP Functional Genomics Resources

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Protein Alignment spi and TRADD

DIOPT Version :9

Sequence 1:NP_001027281.1 Gene:spi / 35253 FlyBaseID:FBgn0005672 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_001310481.1 Gene:TRADD / 8717 HGNCID:12030 Length:312 Species:Homo sapiens


Alignment Length:54 Identity:14/54 - (25%)
Similarity:17/54 - (31%) Gaps:9/54 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ALPPTQAPVTSSTTMRTTTTTTPRPNITF---PTYKCPETFDAWYCLNDAHCFA 99
            |..|.|.||.|.:.::......|.....|   |....|      ..|.|...||
Human   176 ASAPLQPPVPSLSEVKPPPPPPPAQTFLFQGQPVVNRP------LSLKDQQTFA 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spiNP_001027281.1 None
TRADDNP_001310481.1 TRADD_N 51..160 CDD:401105
Nuclear export signal. /evidence=ECO:0000250|UniProtKB:Q3U0V2 147..163
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..195 6/18 (33%)
DD 215..304 CDD:417479 4/9 (44%)
Interaction with KRT14 and KRT18. /evidence=ECO:0000269|PubMed:11684708 222..289 2/2 (100%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q3U0V2 231..244
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6982
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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