DRSC/TRiP Functional Genomics Resources

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Protein Alignment spi and nrg1

DIOPT Version :10

Sequence 1:NP_476909.2 Gene:spi / 35253 FlyBaseID:FBgn0005672 Length:234 Species:Drosophila melanogaster
Sequence 2:XP_012810561.2 Gene:nrg1 / 100496613 XenbaseID:XB-GENE-1011451 Length:673 Species:Xenopus tropicalis


Alignment Length:195 Identity:46/195 - (23%)
Similarity:78/195 - (40%) Gaps:49/195 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SSRTVPK--PRSSISSSMS---GTALPPTQ------------APVTS------------------ 59
            |.||:|.  |.:...:.::   ||:|.||:            ..|||                  
 Frog   129 SVRTLPVLIPTTDAKAPVTLKFGTSLLPTEPTLQPFTPDQILPKVTSVGKSVEPSTLNLIGTTER 193

  Fly    60 ---STTMRTTTTTTPRPNITFPTYKCPETFDAWYCLNDAHCFAVK-IADLPVYSCECAIGFMGQR 120
               :||.|..|||.|...|     ||.:. :..||:|...|:.:. |.....:.|:|...|.|.|
 Frog   194 GRLATTKRGDTTTGPGHLI-----KCSDK-EKTYCVNGGECYVLNGITSSNQFMCKCPNEFTGDR 252

  Fly   121 CEYKEIDNTYLPKRPRPMLEKASIASGAMC-ALVFMLFVCLAFYLRFEQRAAKKAYELEQELQQE 184
            |:...:.:.|   :...:.:|..:....:| ||:.:..:|:..|.:.:::..|....|.|.|:.|
 Frog   253 CQNYVMASFY---KAEELYQKRVLTITGICIALLVVGIMCVVAYCKTKKQRKKLHDRLRQSLRSE 314

  Fly   185  184
             Frog   315  314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spiNP_476909.2 None
nrg1XP_012810561.2 Neuregulin 296..655 CDD:426627 5/19 (26%)

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