DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13078 and cyb561d2

DIOPT Version :9

Sequence 1:NP_609989.1 Gene:CG13078 / 35251 FlyBaseID:FBgn0032809 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_012816466.1 Gene:cyb561d2 / 496973 XenbaseID:XB-GENE-854864 Length:266 Species:Xenopus tropicalis


Alignment Length:225 Identity:50/225 - (22%)
Similarity:87/225 - (38%) Gaps:63/225 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HIESALYVIN----QLCIGFVTIWI-----------SWTCLRQDLSGIRLHAWLVTFGFVFLMAE 63
            |:..||.|::    .|....:|:::           ||            |.:|:|..|.|||.|
 Frog    54 HVFRALRVLSGVAAHLSAFSLTVYMIFVSQPGATLFSW------------HPFLMTLAFSFLMTE 106

  Fly    64 GMMCFYDGSWLTVRYSRNYKTAFHVVLQILGG-----GMGVAGCLIQLIRDDWSISV-------- 115
            .::.|...|.|...:||..:...|.|||:|..     |:|:.          :|..|        
 Frog   107 AILVFSPDSSLLRSFSRRARVQVHWVLQLLCVVCSLLGLGII----------YSNKVLQGKPHFS 161

  Fly   116 TLHARLGFAAFVLCLISLLSGLVAFLARCLSRTISPLVNKTFHV-------VLSFTAFVIAMMAQ 173
            |.|..||....:..|:..:.|:.....:.:.|. :....|.:|.       :|...:.::.|.:.
 Frog   162 TWHGLLGVLTVLWTLLQSVGGVTLLYPKLVQRW-NLATRKLYHATAGLIGYLLGCGSLLLGMCSL 225

  Fly   174 FYGYTQTGIFRGQGQDFVVLMQVVT-MVLM 202
            ::|.:.||:    .....||..|:| :|:|
 Frog   226 WFGASVTGL----SWYLCVLCPVLTGLVIM 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13078NP_609989.1 Cytochrom_B561 48..184 CDD:281217 36/155 (23%)
cyb561d2XP_012816466.1 Cyt_b561_CYB561D2_like 69..249 CDD:176491 44/206 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I5234
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1586923at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15422
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.070

Return to query results.
Submit another query.