DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tep4 and yfhM

DIOPT Version :9

Sequence 1:NP_001260590.1 Gene:Tep4 / 35248 FlyBaseID:FBgn0041180 Length:1498 Species:Drosophila melanogaster
Sequence 2:NP_417015.1 Gene:yfhM / 947302 ECOCYCID:G7323 Length:1653 Species:Escherichia coli


Alignment Length:1655 Identity:311/1655 - (18%)
Similarity:523/1655 - (31%) Gaps:618/1655 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GKYTIVGPGT--------IHSHRDYNVAVAVHQTKEPVTLKVGITGPSYN-KTETVELATA---- 79
            |:|....|.|        :.:||.:|......|:.|....:.||.....| |.:|:..||:    
E. coli   276 GRYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQATSDAQG 340

  Fly    80 ------------------GEFKQITFKLPPLEAGEYNLT-AEGVKGLEFKNSTKLNWENFKPYIK 125
                              |:...:..|||.|:..|:|:. |.|.....|.         |.|   
E. coli   341 HVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFM---------FGP--- 393

  Fly   126 IQTDKGKYKPGDTINYRVIFLD--------ENLRPDTAKDEVVVWFEDSKRNRIKQEKHIKTTGG 182
                :..|:||:|:....:..|        :.::.|..|.:..|     .|:.:.|.::     |
E. coli   394 ----RDLYRPGETVILNGLLRDADGKALPNQPIKLDVIKPDGQV-----LRSVVSQPEN-----G 444

  Fly   183 VYTGKFELSEFATLGSWSLHVQNGDQHHDGGIYFGGRKQFGGFGHRWHRSDELVNFEVEKYVLPK 247
            :|...:.|...|..|.|.:....||..:                ..|       :|.||.::..:
E. coli   445 LYHFTWPLDSNAATGMWHIRANTGDNQY----------------RMW-------DFHVEDFMPER 486

  Fly   248 YSVKM--DATQQVSVRDGEFNVVLKANYTYGKPVNGKVL-----VNVHLDSTSSWENVD-GKTVQ 304
            .::.:  :.|......:.:|:||  ..|.||.|.||..|     :....::.|:....: |    
E. coli   487 MALNLTGEKTPLTPKDEVKFSVV--GYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFG---- 545

  Fly   305 TDYPGHSVVGTADMVGGKAKLTMDLKDFASYLPHKTSSSYAQITATVEEDFTGVKLNETGGVQLY 369
             |....::..|.|.|    :||:|.|.....   .|.|.:.:..:.::..|.| .|.|:||    
E. coli   546 -DIAAENLSRTLDEV----QLTLDDKGRGEV---STESQWKETHSPLQVIFQG-SLLESGG---- 597

  Fly   370 PYRYEMSCTDYSSCFSFKPDKEHELNFKITYVDGSLITDTKSVVKAKFTEGIRRNYA---FYAFG 431
                             :|.....               .:::..|....|||..:|   .|.:.
E. coli   598 -----------------RPVTRRA---------------EQAIWPADALPGIRPQFASKSVYDYR 630

  Fly   432 TDHQEPELPTIEKKTFVFESHLNASGVAPFKVVLPDLPDIANFTRYYSIELEFVDEKRDLYTTYP 496
            ||      .|:::.  :.:...||:    |.:|..|...:.....  .:::..:.|:||.|..:.
E. coli   631 TD------STVKQP--IVDEGSNAA----FDIVYSDAQGVKKAVS--GLQVRLIRERRDYYWNWS 681

  Fly   497 YREPKQ--------IENPSSEEEK-----------EW--FRAEVQRPKDV-----------W--- 526
            ..|..|        |||..:.:.|           ||  :|.||:.|.:.           |   
E. coli   682 EDEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAGYSWQDN 746

  Fly   527 ------------NLKI--------------------GQEYQVILNSSRPLKYFVYNIVGRGNILE 559
                        .||:                    |:.|.::.:|..||.:...::..:|..|.
E. coli   747 SDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWWQEIDVRAQGLDLT 811

  Fly   560 T------KRVDL---------------AEPQTTVNVTIKPTFLTTPYGRVYFYYVDETGEFRYTE 603
            .      .|.||               |.|:..|.|      |..|.|       ||....    
E. coli   812 IPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGV------LHLPLG-------DENRRL---- 859

  Fly   604 ETFSVEVELQNQIEIKAPAEVKPGADVALEIKTSPKS-----FVGLL--AVDQSVLLLGSNNDLN 661
                       .:.::.||:::|...:.::||.|.|:     .|.:|  |||..||         
E. coli   860 -----------DLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVL--------- 904

  Fly   662 KESFNWRLNGYDTSTPWQGGYSYYPGERTGVVTMTNAYFFYNRTAPD----YNILTEG------- 715
                  .:..|.|..|||                  |:|...|...|    |..:.||       
E. coli   905 ------NITDYVTPDPWQ------------------AFFGQKRYGADIYDIYGQVIEGQGRLAAL 945

  Fly   716 -FGGSSFAMR---KTTVAHDSHVF---------HSGAGGPTQAVG-FSAESASASAAPVVRKNFA 766
             |||....::   |..|.|.:.|.         ..|.|..|..:| |:.|          .:..|
E. coli   946 RFGGDGDELKRGGKPPVNHVNIVVQQALPVTLNEQGEGSVTLPIGDFNGE----------LRVMA 1000

  Fly   767 ETWIFADIESTEEEVFKWVKTIPDTITNWVVTGFSLHPQKGLGVTNDQTNIKTFQPFFVSVRLPY 831
            :.|...|..|.|.:|              :|..                      |....:.:|.
E. coli  1001 QAWTADDFGSNESKV--------------IVAA----------------------PVIAELNMPR 1029

  Fly   832 SVKRGEVINVPALVFNYL--PKTLDVELTLDNEDQEYDFVDASN--EVIGDQKRTQNIRVGANEA 892
            .:..|:...:...:.|..  |:.|:|.||            ||.  |::.|              
E. coli  1030 FMASGDTSRLTLDITNLTDKPQKLNVALT------------ASGLLELVSD-------------- 1068

  Fly   893 AGASFLIRPKVIGNILLKFKAISPLAGDAIHKPLKVVPEGITQYQNRAFFINLKDTGEFKNTFE- 956
            :.|:..:.|.|...:.:..:|: |..||                            ||.:.|.. 
E. coli  1069 SPAAVELAPGVRTTLFIPVRAL-PGYGD----------------------------GEIQATISG 1104

  Fly   957 LEVPEDVVPD--------------SERVEFG-----------------------LVGDLL----G 980
            |.:|.:.|.|              ::.|.:|                       |.|.||    .
E. coli  1105 LALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAIPADGLQNFSPVTLEGQLLLSGKP 1169

  Fly   981 P--VVKNLENLLRLPSGCGEQTMSKLVPNYLVRDYLKSIKKLTPALDTRIKRNLQDGYQHMLHYR 1043
            |  :.:.::.|...|.||.|||.|.|.|:............:....|.:.:.::..|...:|..:
E. coli  1170 PLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAAQLQALGIKGDSDEKRRASVDIGISRLLQMQ 1234

  Fly  1044 HDDGSFSSFGPTKWRQEDPVRNGST--WLTAYVL--------RSFSKIKDIIDLDEQILAKGYEF 1098
            .|:|.|:.:.          :||..  ||||||:        :.:|...|.|:       :|.|.
E. coli  1235 RDNGGFALWD----------KNGDEEYWLTAYVMDFLVRAGEQGYSVPTDAIN-------RGNER 1282

  Fly  1099 LLTRQAENGSFTEHGEYFYSSQRSLLTLTANSLLALLEEEKPNQAAIDKAVAYLSANTAESIELL 1163
            ||....:.|..:.  .|..:.:.|...:.:.:.|.|..::|....|: :.:....|:.|..:.||
E. coli  1283 LLRYLQDPGMMSI--PYADNLKASKFAVQSYAALVLARQQKAPLGAL-REIWEHRADAASGLPLL 1344

  Fly  1164 PKSIAIYALQKAKAPEAAKQVASLKSLAKHEDDRTWWTEDLDKLRASKNCGRWWCWIWSQDVEIT 1228
            ...:|:..:..|...|.|..:| ||: .::.|:|.|..:....||                   .
E. coli  1345 QLGVALKTMGDATRGEEAIALA-LKT-PRNSDERIWLGDYGSSLR-------------------D 1388

  Fly  1229 SYALLSLLDSDQETAD---SVLNTV-------RWLIAQRNGFGGFASSQDTVVGLTALIKFAEKS 1283
            :..:||||:.::...|   ::|||:       |||..|.:               .||...|...
E. coli  1389 NALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQES---------------NALFLAARTI 1438

  Fly  1284 GYEAAKWEVTVSNKGKREKTEKLNTSEENDLLLQTVE-----------------FPQGTK----- 1326
            .....||:...|...::...||...|..|...|.|::                 :||...     
E. coli  1439 QDLPGKWQAQTSFSAEQLTGEKAQNSNLNSDQLVTLQVSNSGDQPLWLRMDASGYPQSAPLPANN 1503

  Fly  1327 --SLEFEAKGTGAAMVQI----SYQYNLVEKEPKPSFKIQTTVLPESSPANLELSVCVDYVEEGE 1385
              .:|....||......:    |....||..:.|.|..:...::.:..||.|||           
E. coli  1504 VLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLPAGLEL----------- 1557

  Fly  1386 SKESNMAILEVSLPSGYTADEDSFADIRNI 1415
             :..|:|       :|..:.|.|..:::|:
E. coli  1558 -ENQNLA-------NGSASLEQSGGEVQNL 1579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tep4NP_001260590.1 A2M_N 126..219 CDD:280081 18/100 (18%)
A2M_N_2 528..653 CDD:285005 34/172 (20%)
A2M 768..859 CDD:278630 14/92 (15%)
A2M_2 982..1279 CDD:239227 68/316 (22%)
A2M_comp 1035..1281 CDD:284982 57/265 (22%)
A2M_recep 1389..1479 CDD:284981 6/27 (22%)
yfhMNP_417015.1 YfaS 1..1653 CDD:225248 311/1655 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 1 1.000 - -
Inparanoid 1 1.050 76 1.000 Inparanoid score I382
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11412
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
44.050

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