DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tep4 and c4

DIOPT Version :9

Sequence 1:NP_001260590.1 Gene:Tep4 / 35248 FlyBaseID:FBgn0041180 Length:1498 Species:Drosophila melanogaster
Sequence 2:XP_005157429.1 Gene:c4 / 566261 ZFINID:ZDB-GENE-030131-5697 Length:1700 Species:Danio rerio


Alignment Length:1702 Identity:409/1702 - (24%)
Similarity:677/1702 - (39%) Gaps:424/1702 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IVGPGTIHSHRDYNVAVAVHQTKEPVTLKVGITGPSYNKTETVELATAGEFK----------QIT 86
            ||.|..||...:..|.|.:|...:.:.:|:     .:.|.:..|:.:  |.:          |..
Zfish    24 IVAPNVIHLGVEETVGVQLHGATKEIRMKL-----YFEKQKESEILS--EIRSIILNENNNYQAV 81

  Fly    87 FKLP-------PLEAGEY-NLTAEGVKGLEFKNSTKLN--WENFKPYIKIQTDKGKYKPGDTINY 141
            .||.       .:|...| .|.|......|.:::.|.|  ....:.||.:||||..|.||:.:.|
Zfish    82 VKLKVDATMYGDVEKNSYVQLAAISNDIFEKQDARKANIYLSTKRGYIFVQTDKPIYNPGENVKY 146

  Fly   142 RVIFLDENLRPDTAKDEVVVWFEDSK----RNRIKQEKHI--KTTGGVYTGKFELSEFATLGSWS 200
            |:..||..:.|  .:||:.|...:||    .||:.....|  ||        ..:.|....|.| 
Zfish   147 RIFILDNYMLP--IQDELHVQITNSKGLIVYNRVLIINQILDKT--------ITIPEVEQTGKW- 200

  Fly   201 LHVQNGDQHHDGGIYFGGRKQFGGFGHRWHRSDELVNFEVEKYVLPKYSVKMDATQQVSVRDGE- 264
                               |....| |::..|...|.|||::||||.:.||::|:|...:...| 
Zfish   201 -------------------KIITSF-HKFPESTTTVEFEVKEYVLPTFEVKIEASQPYHILMSES 245

  Fly   265 --FNVVLKANYTYGKPVNGKVLVNVHLDSTSSWENVDGKTVQTDYPG-HSVVGTADMVGGKAKLT 326
              ||:  .|.|||||.|||...|...|        ||.|..:...|| ...:...|...|.|.||
Zfish   246 FPFNI--SARYTYGKGVNGIAYVRFGL--------VDEKHNKIYLPGTEKQITVEDGTAGTAVLT 300

  Fly   327 MDLKDFASYLPH-KTSSSYAQITATVEEDFTG-VKLNETGGVQLY--PYRYEMSCT-DYSSCFSF 386
            .|||..:..:.. .....|..|..:|.:..:| ::..|:..|::.  ||..::|.| .|     |
Zfish   301 KDLKTASQNITQGYIEGYYIYIAVSVLDKASGMLEEAESSSVKIVTSPYVVDLSKTKTY-----F 360

  Fly   387 KPDKEHELNFKITYVDGSLITDTKSVVKAKFTEGIRRNYAFYAFGTDHQEPELPTIE---KKTFV 448
            .|.....:....||.||:      .....|||..|                   ||:   ::...
Zfish   361 TPGGVFSVLATATYPDGN------RAPNLKFTATI-------------------TIDGSSEQILQ 400

  Fly   449 FESHLNASGVAPFKVVLPDLPDIANFTRYYSIELEFVDEKRDLYTTYPYREPKQIENPSSEEEKE 513
            .||..|..|.......:|  |...|..  .::..|..|:      .....:.|...:..:.||:.
Zfish   401 NESWGNEMGDVAMSFQIP--PQAKNLA--ITVFAEGGDQ------VVIRSDNKMTASAITAEEQS 455

  Fly   514 WFRAEVQRPKDVWNLKIGQEYQVILNSSRP-----LKYFVYNIVGRGNILETKRVDLAEPQTT-- 571
            :...||::.    .|:.|::.:..|....|     ..:|.:.:..:|.|::..||    |:|.  
Zfish   456 YLSLEVEKQ----FLQAGEDLKARLRDITPEGAAKPTFFYFMVWSKGQIVQMGRV----PRTAFT 512

  Fly   572 -----VNVTIKPTFLTTPYGRVYFYYVDETGEFRYTEETFSVEVE--LQNQIEIKAPAEVKPGAD 629
                 |||.:.|:|....|     |:.....:.....::..|:|:  .:.:|||...||:||...
Zfish   513 TVNVKVNVDMVPSFRLVAY-----YFTGSASKESVVADSVWVDVKDVCKGKIEINPLAEIKPATQ 572

  Fly   630 VALEIKTSPKSFVGLLAVDQSVLLLGSNNDLNKESFNWRLNGYDTSTPWQGGYSYYPGERTGVVT 694
            ..:.::|:||:.|.|:|||.:|.:|..|....::.|:: :|.||.:....||     .:.:.|:.
Zfish   573 FEVTVETNPKTKVALVAVDSAVYILNKNKLSLQKMFDY-MNSYDLACSVGGG-----EDSSAVLQ 631

  Fly   695 MTNAYFFYN---------------------RTAPD----YNILTEGFGG---------------- 718
            .....|..|                     |.|||    ||.:...|..                
Zfish   632 RAGLTFICNCALKTPTALEHKCNKKTTNRVRRAPDYVAKYNAVVNSFKNQDRKCCLDGVRPSKMQ 696

  Fly   719 ---------------------------------SSFAMRKTTVAHDSHVFHSGAGGPTQAVGFSA 750
                                             ..|..|||::.              :.||.|.
Zfish   697 TSCVDRLKRVKESESCRKAFKECCEAADERRKREKFEKRKTSLG--------------RVVGDSF 747

  Fly   751 ESASASAAPV-VRKNFAETWIFADIESTEEEVFKWVKTIPDTITNWVVTGFSLHPQKGLGVTNDQ 814
            :....:...: :|..|.::|::..|||..:.:.:.....||:||.|.|....:.|.||..:...:
Zfish   748 DEIVINEDLIYIRNYFPQSWMWTVIESDNKGLIRHEVVAPDSITTWEVQAVGISPTKGFCIAEPK 812

  Fly   815 TNIKTFQPFFVSVRLPYSVKRGEVINVPALVFNYLPKTLDVELTLDNEDQEYDFVDASNEVIG-- 877
            . :..|:.||:||.|||||||.|.:.|.|:|:||..::|.|.:.|             |:|.|  
Zfish   813 P-LTVFKDFFLSVNLPYSVKRNEQLQVKAVVYNYKQESLKVIVKL-------------NKVEGLC 863

  Fly   878 -----DQKRTQNIRVGANEAAGASFLIRPKVIGNILLKFKA-ISPLAGDAIHKPLKVVPEGITQY 936
                 |.|  :.:.|..|.|....|.:.|.:|||:.:...| .|.:..|.:.|.|:|..||....
Zfish   864 TAGGNDVK--EEVTVSGNSAVTVYFTVVPLIIGNLHIDVLAYASEIIHDRVEKKLRVEGEGELTS 926

  Fly   937 QNRAFFI--NLKDTGEFKNTFELEVPEDVVP---DSERVEFGLVGDLLGPVVKN------LENLL 990
            .:|.|.|  |||     |..|.:..|.|.||   ||| ...|..|.::|..:.|      ::.|:
Zfish   927 IDREFNIDPNLK-----KIEFNISSPVDEVPAGSDSE-TSLGFKGGVMGESIDNCLNLEGIDKLI 985

  Fly   991 RLPSGCGEQTMSKLVPNYLVRDYLKSIKKLTPALDTRIKRN------LQDGYQHMLHYRHDDGSF 1049
            :||:||.||||.|:.|......||.:..:.   |..:.:|.      :|.||..:|.::.||||:
Zfish   986 QLPTGCAEQTMVKMSPAIHAMRYLDATNQW---LSLKAERRDEARSMIQTGYNTVLTHKKDDGSY 1047

  Fly  1050 SSFGPTKWRQEDPVRNGSTWLTAYVLRSFSKIKDIIDLDEQILAKGYEFLLTRQAENGSFTEHGE 1114
            .:|..|.         .|.||||::.:..:..:||:::::..:.:...:|:::|..||::.:...
Zfish  1048 GAFLRTP---------SSIWLTAFIAKELTGSQDIVNVNKLYIQEAMSYLISKQKSNGAWDDPNR 1103

  Fly  1115 YFYSSQR-------SLLTLTANSLLAL--------LEEEKPNQAAIDKAVAYLSANTAESIELLP 1164
            .|....:       ..:.|||..|:::        |..:...:.|:|||.:||.|. .:::. .|
Zfish  1104 LFDQGMKGGVEQATDDVPLTAFVLISMHHALKVYDLGSDTELRVAMDKAKSYLEAQ-LDAVR-SP 1166

  Fly  1165 KSIAI----YALQKAKAPEAAKQVASLKSLAKHEDDRTWWT------EDLDKLRASKNCGRWWCW 1219
            .|:|:    ::|...::.||.|....|:.:|..:|...:|.      |..||..|          
Zfish  1167 YSLAVTAYSFSLHDHRSAEARKAQQKLQDIANCDDKMCFWKAKGGRGEPKDKADA---------- 1221

  Fly  1220 IWSQDVEITSYALL-SLLDSDQETADSVLNTVRWLIAQRNGFGGFASSQDTVVGLTALIKFAEKS 1283
               :.||.|:|||| :|:..|:..:..:.|   ||..||...|||.|:||||:.|.||.|::.::
Zfish  1222 ---RSVETTAYALLTTLIVGDKSKSKLIAN---WLTEQRRHGGGFRSTQDTVLALEALTKYSIQN 1280

  Fly  1284 GYE---AAKWEVTVSNKGKREKTEKLNTSEENDLLLQTVEFPQGTKSLEFEAKGTGAAMVQISYQ 1345
            ...   ..:.|:.:.|..|::    |:.::.|.|.|..|:. :....:....:|||...:.:...
Zfish  1281 NDVDDLNLRVEMCLENGQKKD----LHLTKNNALTLSAVKV-RDVGKVTLNIQGTGRGTLAVVQT 1340

  Fly  1346 YNLVEKEPK--PSFKIQTTVLPE------SSPANLELSVCVDYVEEGESKES------------- 1389
            |..::|:..  ..|.:..||..|      :|...||     ||.|..::.|:             
Zfish  1341 YRTMKKDESFCDLFHLTVTVKGELEYKTDNSQDLLE-----DYYESYDTSEAQNDEPMSNMQWFD 1400

  Fly  1390 ---------------------------------NMAILEVSLPSGYTAD-EDSFADIRNIERVRL 1420
                                             .|.|:::||.||...: :|...:::..|:. :
Zfish  1401 LRSRRKRQISEEPIKESSLIYTVCVGLKKKNSEGMIIVDISLLSGLIPNSKDLEHNVKGTEKY-I 1464

  Fly  1421 VETKNGDSVVVIYFENLAKNEEKCIRIEAYRTHAVANQKPSSVVLYDYYDTNKKATEYYSIKSK- 1484
            ...:...:.|.:||..:.:.|| |::..|.:...:...:|:|.|:||||...|:...:|:...| 
Zfish  1465 DHYEIHHNKVYLYFAKITETEE-CLQFGADQAVPMGLVQPASAVIYDYYSPEKRCGIFYTAPQKS 1528

  Fly  1485 --LCDICEGDDC 1494
              :..:|:||.|
Zfish  1529 PMISKLCQGDVC 1540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tep4NP_001260590.1 A2M_N 126..219 CDD:280081 25/98 (26%)
A2M_N_2 528..653 CDD:285005 36/138 (26%)
A2M 768..859 CDD:278630 33/90 (37%)
A2M_2 982..1279 CDD:239227 90/334 (27%)
A2M_comp 1035..1281 CDD:284982 74/271 (27%)
A2M_recep 1389..1479 CDD:284981 23/136 (17%)
c4XP_005157429.1 A2M_N 128..220 CDD:280081 33/122 (27%)
A2M_N_2 459..595 CDD:285005 37/148 (25%)
ANATO 675..731 CDD:237984 1/55 (2%)
A2M 766..856 CDD:278630 33/90 (37%)
complement_C3_C4_C5 977..1276 CDD:239226 89/328 (27%)
A2M_comp 1032..1278 CDD:284982 74/272 (27%)
A2M_recep 1434..1522 CDD:284981 23/89 (26%)
NTR_complement_C4 1540..1698 CDD:239639 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584115
Domainoid 1 1.000 48 1.000 Domainoid score I11904
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11412
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.810

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