DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tep4 and Mcr

DIOPT Version :9

Sequence 1:NP_001260590.1 Gene:Tep4 / 35248 FlyBaseID:FBgn0041180 Length:1498 Species:Drosophila melanogaster
Sequence 2:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster


Alignment Length:1752 Identity:414/1752 - (23%)
Similarity:693/1752 - (39%) Gaps:428/1752 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LALLQTMEPVKAEGKYTIVGPGTIHSHRDYNVAVAVHQTKEPVTLK-------VGITGPSYNKTE 72
            |..|.:.||........:|.||.|     |.|:|::.|.:.|:|:.       |.|:|.|.:..|
  Fly   122 LESLHSREPTYFIVASRMVRPGLI-----YQVSVSILQAQYPITVHASIACDGVQISGDSKDVKE 181

  Fly    73 TVELATAGEFKQITFKLPPLE-AGEYNLTAEG-----VKGLEFKNSTKLNWENFKPYIKIQTDKG 131
            .:.       :.:..::||.. .|.|.|..||     ..||.|.|.|:|::......|.:||||.
  Fly   182 GIP-------ETLLMRIPPTSVTGSYKLRVEGFYQNVFGGLAFLNETRLDFSQRSMTIFVQTDKP 239

  Fly   132 KYKPGDTINYRVIFLDENLRP-DTAKDEVVVWFEDSKRNRIKQEKHIKTTGGVYTGKFELSEFAT 195
            .|..|:|:.:|.|.:...|:. |...|   |:..|..|:.:|:....::..|..:.:::||:..|
  Fly   240 LYMQGETVRFRTIPITTELKGFDNPVD---VYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPT 301

  Fly   196 LGSWSLHV-QNGDQHHDGGIYFGGRKQFGGFGHRWHRSDELVNFEVEKYVLPKYSVKMDATQQVS 259
            .|.|::.| ..|.|                         |..:|.||:|...::.|.:.......
  Fly   302 FGEWTIRVIAQGQQ-------------------------EESHFTVEEYYQTRFEVNVTMPAYFF 341

  Fly   260 VRDGEFNVVLKANYTYGKPVNGKVLVNV----------------------HLDSTS----SWE-N 297
            ..|......:.||:|.|.||.|.:.:..                      .|:.|:    .|. |
  Fly   342 TTDPFIYGRVMANFTSGLPVRGNLTIKATIRPIGYFSNQVLNEKYRLGRSPLEQTNLYNERWRYN 406

  Fly   298 VDGKTVQTDYPGHSVVGTADMVGGKAKLTMDLKDFASYL-----------------PHKTSSSYA 345
            ...:..|..|   :|.|.....|  |.|:.|:.....|:                 |....|||.
  Fly   407 NPNQNPQVQY---NVPGQLPQDG--ADLSQDILYRNQYVVERHYQFDEEWPFWVRKPEYQDSSYE 466

  Fly   346 QITATVEEDFTGVKLNETGGVQLYPY-RYEMSCTDYSSCFSFK-PDKEHEL---NFKITYVDGSL 405
            ..:.|..:..              || ||      ::..|.|| |.:|.||   |...:.|   |
  Fly   467 AWSGTYRKTL--------------PYLRY------FNGTFDFKWPLRELELLVPNLANSEV---L 508

  Fly   406 ITDTKSVVKAKFTEGIRRNYAFYAFGTDHQEPELPTIEKKTFVFESHLNA--SGVAPFKVVLPDL 468
            ||.|   |..||.:.|...|:.                  ..|:.|.|..  .|.:| :|..|.:
  Fly   509 ITAT---VGEKFYDEIISGYSV------------------ARVYNSSLRVVFLGDSP-QVFKPAM 551

  Fly   469 PDIANFTRYYSIELE-------------------FVDEKRDLYTTYP-YREPKQIENPSSEEEKE 513
            |    ||.|.::|..                   ||:.:......:| .|.|...::....|.|.
  Fly   552 P----FTTYLAVEYHDGSPIDPNLLRQGLMEVSGFVESRNGGRRDWPAQRLPMSQQSDGIWEVKI 612

  Fly   514 WFRAEV---QRPK------DVWNLKI-------------------------GQEYQVILNSSRP- 543
            ..|.::   .||:      .|.|:::                         .|..:|..::.:| 
  Fly   613 DIRNDLNLDDRPQARDFLNGVQNMRLQANFVDPRGERIQTELLLVSHYSPRNQHIKVTTSTEKPV 677

  Fly   544 --------------LKYFVYNIVGRGNILETKRVDLAEPQTTVNVTIKPTFLTTPYGRVYFYYVD 594
                          |:.|.|.|:.:|.||...|..:.|...|:.|.:....  .|...:..:.::
  Fly   678 VGEYIIFHIRTNFYLEEFNYLIMSKGVILVNDRETITEGIKTIAVVLSSEM--APVATIVVWKIN 740

  Fly   595 ETGEFRYTEETFSVEVELQNQIEI-----KAPAEVKPGADVALEIKTSPKSFVGLLAVDQSVLLL 654
            :.|:......||.|....:|...:     ||    :.|..|.:.|...|.|:|||..:|.:...:
  Fly   741 QQGQVVADSLTFPVNGISRNNFTVYINNRKA----RTGEKVEVAIFGEPGSYVGLSGIDSAFYTM 801

  Fly   655 GSNNDLNKESFNWRLNGYDTSTPWQGGYS--------------YYPG-----------ERTGVVT 694
            .:.|:|.......:::.:|..|  .|.|.              |:|.           |.:|::.
  Fly   802 QAGNELTYAKIITKMSNFDEQT--NGTYKHIWYSHEGNPDELVYFPASSFGVDANRTFEYSGLIV 864

  Fly   695 MTNAYF-----FYNRTAPDYNILTEGFG----GSSFAMRKT----------TVAHDSHVFHSGAG 740
            .|:.|.     ..|||.        |||    |..:.:.|.          |...:.|     |.
  Fly   865 FTDGYVPRRQDTCNRTL--------GFGECLSGRCYRLEKQCDGLFDCDDGTDEINCH-----AR 916

  Fly   741 GPTQAVGFSAESASASAAPVVRKNFAETWIFADIESTEEEVFKWVKTIPDTITNWVVTGFSLHPQ 805
            ..|:.:.:.....:.     |.:::...|::.|:.......:.:...:||....|:|:.||:.|.
  Fly   917 NDTELLNYRKYRFNR-----VLRHYENVWLWKDVNIGPHGRYIFNVEVPDRPAYWMVSAFSVSPS 976

  Fly   806 KGLGVTNDQTNIKTFQPFFVSVRLPYSVKRGEVINVPALVFNYLPKTLDVELTLDNEDQEYDFVD 870
            ||.|:.|........||||::|.:|.:.::||.:.:...||||:...::..:.| ::..:|.||.
  Fly   977 KGFGMMNKALEYVGVQPFFINVEMPEACRQGEQVGIRVTVFNYMITPIEAIVVL-HDSPDYKFVH 1040

  Fly   871 ASNEVIGDQKRTQNIRVGAN--------EAAGASFL---IRPKVIGNILLKFKAISPLAGDAIHK 924
            ...:.|   .|:.|.|....        ||.|.:.:   :.|:.:||:.:.....:.|..|.|.:
  Fly  1041 VEEDGI---VRSYNPRTSFGEHQFFIYLEAQGTTVVYVPVVPQRLGNVDVTLHVATLLGTDTITR 1102

  Fly   925 PLKVVPEGITQYQNRAFFINLKDTG---EFKN---TFELEVPEDV----VPDSERVEFGLVGDLL 979
            .|.|..:|:.||::::..::|.:..   |:.:   |...|:|..|    |..|.:....:|||::
  Fly  1103 TLHVESDGLPQYRHQSVLLDLSNRAYVLEYMHVNVTQTPEIPYQVDRYFVYGSNKARISVVGDVV 1167

  Fly   980 GPVVK----NLENLLRLPSGCGEQTMSKLVPNYLVRDYLKSIKKLTPALDTRIKRNLQDGYQHML 1040
            ||:..    |..:||.||...|||.......|.....|::.|.:....|:.....::..|||..|
  Fly  1168 GPIFPTMPVNASSLLSLPMESGEQNAFSFAANLYTIMYMRLINQRNKTLEKNAFYHMNIGYQRQL 1232

  Fly  1041 HYRHDDGSFSSFGPTKWRQEDPVRNGSTWLTAYVLR-----SFSKIKDIIDLDEQILAKGYEFLL 1100
            .:...|||||.| .:.|...|    .|.|||:|.||     ||.:.::.|.:|..|:.|...:||
  Fly  1233 SFMRPDGSFSLF-RSDWNNSD----SSVWLTSYCLRVFQEASFYEWENFIWIDATIIEKNMRWLL 1292

  Fly  1101 TRQAENGSFTEHGEYFYSSQRSL--------LTLTANSLLALLEEEKPN-------QAAIDKAVA 1150
            ..|...|||.   |..:...|.:        :|||::.|:.|...:..:       ..|..:|:|
  Fly  1293 QHQTPQGSFF---EVTWLPDRKMNRTNFDKNITLTSHVLITLATVKDISGTLGSRVALATQRALA 1354

  Fly  1151 YLSANTAESIELL-----PKSIAI--YALQKAKAPEAAKQVASLKSLAKHEDDRTWW-TEDLD-- 1205
            |:..|    ::.|     |..:||  ||||...:|.|.:..|.|:..|:...|..:| .:::.  
  Fly  1355 YIERN----MDFLRHQAQPFDVAITAYALQLCNSPIAEEVFAILRRQARTIGDFMYWGNQEIPQP 1415

  Fly  1206 --KLRASKNCGRWWCWIW-----------SQDVEITSYALLSLLDSDQETADSVLNTVRWLIAQR 1257
              ||...|         |           |.::|.|:||||..:...:...|.:   ||||.:||
  Fly  1416 PRKLENQK---------WFSLPRLPYEYDSLNIETTAYALLVYVARREFFVDPI---VRWLNSQR 1468

  Fly  1258 NGFGGFASSQDTVVGLTALIKFAEKSGY-EAAKWEVTVSNKGKREKTEKLNTSEENDLLLQTVEF 1321
            ...||:||:|||...|.||:::..:|.. |.:...|.:....:..||:.|...:.|...||::|.
  Fly  1469 LNDGGWASTQDTSAALKALVEYTVRSRLREVSSLTVEIEASSQGGKTQTLYIDDTNLAKLQSIEI 1533

  Fly  1322 PQGTKSLEFEAKGTGAAMVQISYQYNL-VE----KEPKPSFKIQT-TVLPESSPANLELSVCVDY 1380
            |....:::.:|||.|.|::|:..|||: :|    |.|.|:|.:.| .:....:.:::....|.::
  Fly  1534 PDAWGTIKVQAKGAGYAILQMHVQYNVDIEKFQTKPPVPAFGLHTKAIFHGRNQSHISYVACQNW 1598

  Fly  1381 VEEGESKESNMAILEVSLPSGYTADE---DSFA---DIRNIERVRLVETKNGDSVVVIYFENLAK 1439
            :.:.||:.|.||:|:|::|:||...:   |::.   .:||:.|.|.:|.|     :|.||:.| .
  Fly  1599 INQNESERSGMAVLDVAIPTGYWIQQQKLDTYVLSNRVRNLRRARYLERK-----IVFYFDYL-D 1657

  Fly  1440 NEEKCIRIEAYRTHAVAN-QKPSSVVLYDYYDTNK------KATEYYSIKSKLCDICEGDDC 1494
            :|:.|:.....|.:.||| .:...|.:||||...:      .|...|.:  .:|::|....|
  Fly  1658 HEDICVNFTIERWYPVANMSRYLPVRIYDYYAPERFNESIFDALPTYLL--NICEVCGSSQC 1717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tep4NP_001260590.1 A2M_N 126..219 CDD:280081 25/94 (27%)
A2M_N_2 528..653 CDD:285005 31/169 (18%)
A2M 768..859 CDD:278630 25/90 (28%)
A2M_2 982..1279 CDD:239227 98/343 (29%)
A2M_comp 1035..1281 CDD:284982 86/288 (30%)
A2M_recep 1389..1479 CDD:284981 31/102 (30%)
McrNP_524688.1 A2M_N 232..332 CDD:280081 31/127 (24%)
A2M_N_2 669..799 CDD:285005 30/135 (22%)
LDLa 886..913 CDD:238060 3/26 (12%)
A2M 940..1030 CDD:278630 25/89 (28%)
ISOPREN_C2_like 1177..1490 CDD:298658 98/336 (29%)
A2M_comp 1226..1492 CDD:284982 86/289 (30%)
A2M_recep 1607..1695 CDD:284981 30/93 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2373
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I382
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10215at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11412
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.970

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