DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tep4 and a2ml1

DIOPT Version :9

Sequence 1:NP_001260590.1 Gene:Tep4 / 35248 FlyBaseID:FBgn0041180 Length:1498 Species:Drosophila melanogaster
Sequence 2:XP_031760638.1 Gene:a2ml1 / 100127688 XenbaseID:XB-GENE-5943821 Length:1486 Species:Xenopus tropicalis


Alignment Length:1630 Identity:427/1630 - (26%)
Similarity:687/1630 - (42%) Gaps:313/1630 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLCVILALLQTMEPVKAEGKYTIVGPGTIHSHRDYNVAVAVHQTKEPVTLKVGITGPSYNKTETV 74
            :|.:.|.||.....::|:..|.:|.|..:..|......|.:...:....::|.:.....|.| .:
 Frog     6 ALGLALVLLHLSGTLEAKLHYAVVFPSEMRCHSSEQACVHLSGAEGDSRIQVTLNMAERNST-VI 69

  Fly    75 E--LATAGEFKQITFKLPPLEAGEYNLTAEGV----KGLEFKNSTKLNWENFKPYIKIQTDKGKY 133
            |  |.....|..:||::||...|...:....:    .|....||:|:..:..:....|||||..|
 Frog    70 ERNLRQKSLFSCVTFQVPPPSEGNEEVATMEILIESAGETITNSSKVLVKRRRTSTFIQTDKAVY 134

  Fly   134 KPGDTINYRVIFLDENLRPDTAKDEV-VVWFEDSKRNRIKQEKHIKTTGGVYTGKFELSEFATLG 197
            |||.|:.:||:.|.|||:|  .:::: |:..:|..:|||.|...:..|.|:......||...:||
 Frog   135 KPGQTVRFRVVSLKENLQP--GENQISVIQLQDPNKNRIAQWLDVTLTQGIAELSLPLSPEPSLG 197

  Fly   198 SWSLHVQNGDQHHDGGIYFGGRKQFGGFGHRWHRSDELVNFEVEKYVLPKYSVKMDATQQVSVRD 262
            .:|:||  ||..|                          .|.||:|||||:.|.....:.|....
 Frog   198 EYSIHV--GDTVH--------------------------YFSVEEYVLPKFEVSFQFPKVVFFTS 234

  Fly   263 GEFNVVLKANYTYGKPVNGKVLVNVHLDSTSSW--ENVDGKTVQTDYPGHSVVGTADMVGGKAKL 325
            .:|.:.....|||||||.|.....|.......|  .|.|...:..|:.     |..|. .|.:.|
 Frog   235 EQFQLKTCGRYTYGKPVQGTYKATVCRKVIRYWWGHNDDRSDLCVDFS-----GKLDQ-SGCSTL 293

  Fly   326 TMDLKDFASYLPHKTSSSYAQITATVEEDFTGVKLNETGGVQLYPYRYEMSCTDYSSCFSFKPDK 390
            |...::|  .|.:.|.....:.|:|:.|..|||:.:.:|...:  .....||:...:..::||  
 Frog   294 TATSENF--NLTYNTHEMGLEGTSTITEGGTGVEYSGSGKTII--SSVVTSCSFLDADSNYKP-- 352

  Fly   391 EHELNFKITYVDGSLITDTKSVVKAKFTEGIRRNYAFYAFGTDHQEPELPTIEKKTFVFESHLNA 455
                        |...:.|..||.|                  :.:|    |..:.....||.|.
 Frog   353 ------------GIPYSGTVKVVDA------------------NDDP----IPNQIVYLTSHSNE 383

  Fly   456 SGVAPFKVVLPDLPDIANFTRYYSIELEFVDEKRDLYTT----YPYREPKQIE----------NP 506
            ..    |.::.|...:|:|....:.|.:.....|...||    :.:.:.:.|.          .|
 Frog   384 VN----KTLVSDENGLASFQLENTAEWKGQLSLRASTTTQDAGFDFLQGRLITPNDVSASLMLKP 444

  Fly   507 SSEEEKEWFRAEVQR-------PKDVWNLKIGQEYQVILNSSRPLKY----FVYNIVGRGNILET 560
            .....|.:.:...|:       .:||     ..|| :|.||:..::.    ..|.:..:|::.::
 Frog   445 FHSPSKSFLKLHSQQGALPCEGQRDV-----RVEY-IIPNSALGIEVKHMELHYLVASKGSVKDS 503

  Fly   561 KRVDLAEPQT-----------------TVNVTIKPT-----FLTTPYGRVYFYYVDETGEFRYTE 603
            ..|::  |.|                 |::..:.||     |::.|           .||.....
 Frog   504 GSVEV--PITSEGGGSSELRGEVSIKLTLSADVSPTLRALAFISLP-----------NGELVADS 555

  Fly   604 ETFSVEVELQNQIEIK-APAEVKPGADVALEIKTSPKSFVGLLAVDQSVLLLGSNNDLNKESFN- 666
            .||.::...:|::.:. :|.||.|||||:|:::.:..|..||..|||||:|:..:.:|..:..: 
 Frog   556 ATFKLQRCFKNKVSVGFSPDEVLPGADVSLQVQAAAGSLCGLRVVDQSVVLMKPDKELTADQIHN 620

  Fly   667 ----WRLNGYDTST-------------------------PWQ-------GGYSYYPGERTGVVTM 695
                ....|||...                         ||.       ..||.:...|..:||.
 Frog   621 LFPFPDFGGYDARVQDSDDHCPFYPWFHRPMWKRSIVLPPWHMPHEDEVDVYSLFKDMRLKIVTS 685

  Fly   696 TNAYFFYNRTAPDYNILTEGFGGSSFAMRKTTVAHDSHVFHSGAG---GPTQAVGFSAESASASA 757
            ...........|:            ||::...:|| ..:..:|.|   ...:|||...| .:..|
 Frog   686 AEIKKPLRCREPE------------FALQYNVLAH-PRIADAGDGLVRAMPKAVGVGNE-LTEPA 736

  Fly   758 APVVRKNFAETWIFADIESTEE----EVFKWVKTIPDTITNWVVTGFSLHPQKGLGVTNDQTNIK 818
            |.::|..|.||||: .:|...|    ||.   .:.|||||.|....|.:.| .|.|: :..|:::
 Frog   737 AEIIRAYFPETWIW-QLEPVGESGRAEVH---GSAPDTITEWNAGAFCMGP-SGFGI-SPPTSLR 795

  Fly   819 TFQPFFVSVRLPYSVKRGEVINVPALVFNYLPKTLDVELTLDNE---------DQEYDFVDASNE 874
            .||||||.:.|||||.|||...:.|.|||||.:.:.|:.||...         |.:|     |:.
 Frog   796 AFQPFFVELTLPYSVVRGESFTLKASVFNYLKQCIKVQTTLQPSLELEQEPCADCQY-----SSC 855

  Fly   875 VIGDQKRTQNIRVGANEAAGASFLIRPKVIG--NILLKFKAISPLAG--DAIHKPLKVVPEGITQ 935
            :..|:.:|....:.|:.....:..:|.:.:.  ::......|.|..|  |.:.|||.|.|.|:..
 Frog   856 ICADESKTFYWNLKASNLGEVNITVRTEALNTQDMCNNEIPIVPKQGHSDTVIKPLLVQPGGVLI 920

  Fly   936 YQNRAFFINLKDTGEFKNT--FELEVPEDVVPDSERVEFGLVGDLLGPVVKNLENLLRLPSGCGE 998
            .::.:..|...:..:...|  ..|.|||:::..|||.....:|||:|..::||:.||.:|.||||
 Frog   921 EKSHSSLICSPEGEDHSKTEDISLNVPENILEGSERAYVTALGDLMGTAMQNLDRLLAMPYGCGE 985

  Fly   999 QTMSKLVPNYLVRDYLKSIKKLTPALDTRIKRNLQDGYQHMLHYRHDDGSFSSFGPTKWRQEDPV 1063
            |.|....||..:..||::..:|:|.:.|:.|..|:.|||..|.|:.:|||:|:||     ..|| 
 Frog   986 QNMVLFAPNIFILQYLENTHQLSPEIQTKAKGFLESGYQRQLTYKRNDGSYSAFG-----SRDP- 1044

  Fly  1064 RNGSTWLTAYVLRSFSKIKDIIDLDEQILAKGYEFLLTRQAENGSFTEHGEYFYSSQR----SLL 1124
             .|:|||||:|::||||.:..|.:|...|...:.:|..::..:|.|...|:.|.::.:    ..:
 Frog  1045 -EGNTWLTAFVVKSFSKARPYIFIDGDHLNHSFSWLKDKRQRSGCFRSVGKLFNNAMKGGVDDEI 1108

  Fly  1125 TLTANSLLALLE----EEKP---------NQAAIDKAVAYLSANTAESIELLPKSIAIYALQKAK 1176
            :|:|...:||:|    :|.|         .:||...:.||..|..|.:..|           ...
 Frog  1109 SLSAYVTIALMEAGLSKEDPMVSDALSCLRKAARKVSSAYTQALLAYTFTL-----------SDD 1162

  Fly  1177 APEAAKQVASLKSLAKHEDDRTWWTEDLDKLRASKNCG-RWWCWIWSQDVEITSYALLSLLDSDQ 1240
            .....|.:|.|:..|..:|.:..|    ::..|||... .:|....|.:||:||||||:||....
 Frog  1163 TKHREKLLAKLEEKAVRKDGQLHW----ERKPASKASDLPYWYRAPSAEVELTSYALLALLSGPN 1223

  Fly  1241 ETADSVLNTVRWLIAQRNGFGGFASSQDTVVGLTALIKFAEKSGYEAAKWEVTVSNKGKREKTEK 1305
            :........|.||..|:|.:|||:|:|||||.|.||.::||.:..:  |.:|||:...|....::
 Frog  1224 KDLGKASEIVNWLSKQQNPYGGFSSTQDTVVALQALAEYAEATFSD--KGDVTVTVTSKTGFHQQ 1286

  Fly  1306 LNTSEENDLLLQTVEFPQGTKSLEFEAKGTGAAMVQISYQYNLVEKEPKPSFKIQTTVLPESSPA 1370
            .:..:.|.||||....|.........|.|:|...||...:||:.......:|.::....|:..|.
 Frog  1287 FHVDQTNRLLLQKASLPDIPGEYSLSATGSGCVYVQTVLRYNIPPPRSDATFSVRVETQPQQCPQ 1351

  Fly  1371 NLELSVCVD-YVE-EGESKESNMAILEVSLPSGYTADEDSFAD-IRNIERVRLVETKNGDSVVVI 1432
            .....:.:| |:: .|..::||||::||.:.||:|.|:.|... ||....:...||:.  ..|..
 Frog  1352 EPMKQMGIDIYIQYTGSREKSNMALVEVKMLSGFTPDKKSIDQVIRWNNFIMWSETQT--DKVTF 1414

  Fly  1433 YFENLAKN--------EEKCIRIEAYRTHAVANQKPSSVVLYDYYDTNKKA-TEYYSIKSKLCDI 1488
            |...|.::        |::.:         |.|.:|:.|.:||||:..:.| |||.|       .
 Frog  1415 YLSELGRHPVNFSFMVEQEVL---------VKNLRPAIVKVYDYYEPVEHAVTEYNS-------P 1463

  Fly  1489 CEGDD 1493
            |..|:
 Frog  1464 CSSDE 1468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tep4NP_001260590.1 A2M_N 126..219 CDD:280081 35/93 (38%)
A2M_N_2 528..653 CDD:285005 37/151 (25%)
A2M 768..859 CDD:278630 39/94 (41%)
A2M_2 982..1279 CDD:239227 104/314 (33%)
A2M_comp 1035..1281 CDD:284982 84/263 (32%)
A2M_recep 1389..1479 CDD:284981 30/99 (30%)
a2ml1XP_031760638.1 A2M_N 124..222 CDD:396416 43/127 (34%)
MG3 214..303 CDD:407663 27/96 (28%)
MG4 342..420 CDD:407661 20/117 (17%)
A2M_N_2 453..607 CDD:400170 40/172 (23%)
A2M 747..836 CDD:395153 39/94 (41%)
SVA <798..893 CDD:398804 29/99 (29%)
A2M_2 969..1262 CDD:239227 104/314 (33%)
A2M_recep 1372..1460 CDD:400149 29/98 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I11799
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9328
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X292
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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