DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10132 and wds

DIOPT Version :10

Sequence 1:NP_609979.2 Gene:CG10132 / 35239 FlyBaseID:FBgn0032798 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_524984.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster


Alignment Length:395 Identity:84/395 - (21%)
Similarity:143/395 - (36%) Gaps:136/395 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   976 EQEKPSDDAVPSSVPVKGYDVLMNLPQPGCYVA--SMCTDRSEICIWDVKNCCRIR-ELQGIQQP 1037
            :|..|:..:.|:|:...      ::.|||...:  |..:::|.:   .||....:: .|.|..:.
  Fly    19 QQPLPTAPSGPNSLQPN------SVGQPGATTSSNSSASNKSSL---SVKPNYTLKFTLAGHTKA 74

  Fly  1038 TA---MCPVGNYEAAVLCRREIRVINLDEGKFKVTLKGVMNQKMPYFGLHDQNHLVCLSRNRMYV 1099
            .:   ..|.|.:.|:....:.|::....:|||:.|:.|                           
  Fly    75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------------------------- 112

  Fly  1100 NLMNLESGDCVTTFKAGEDRFLNSLLVSGDGRILVCG--DETQKPFPLLVWHLSQRKLLYDLRIP 1162
                         .|.|    ::.:..|.|.|:||.|  |:|.|     ||.||..|.|..|: .
  Fly   113 -------------HKLG----ISDVAWSSDSRLLVSGSDDKTLK-----VWELSTGKSLKTLK-G 154

  Fly  1163 HHDFITSLSAITHEGSYVCVVAKELNEPTTPNFIVVYDLQSGTLFKKWKPACNTVSLAISQVNAC 1227
            |.:::           :.|            ||               .|..|           .
  Fly   155 HSNYV-----------FCC------------NF---------------NPQSN-----------L 170

  Fly  1228 VIAGLEDAKILIWDLVTGNCKSTLIGHNAPVTFLKLDPLGKVLLSYDKEGRDSAVRMWELNSAKS 1292
            :::|..|..:.|||:.||.|..||..|:.||:.:..:..|.:::|   ...|...|:|:..|.:.
  Fly   171 IVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS---SSYDGLCRIWDTASGQC 232

  Fly  1293 LAVF----KPPAQVSTCEILPNGAFVVLALKDRNSLLTLALKNYGGGSGALDDDCGTLY-GNPDN 1352
            |...    .||  ||..:..|||.:::.|..|.    ||.|.:|..|.      |...| |:.:.
  Fly   233 LKTLIDDDNPP--VSFVKFSPNGKYILAATLDN----TLKLWDYSKGK------CLKTYTGHKNE 285

  Fly  1353 QHKVF 1357
            ::.:|
  Fly   286 KYCIF 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10132NP_609979.2 AAA_22 474..599 CDD:379165
WD40 repeat 1039..1072 CDD:293791 8/35 (23%)
WD40 <1042..1321 CDD:441893 61/284 (21%)
WD40 repeat 1079..1114 CDD:293791 0/34 (0%)
WD40 repeat 1122..1160 CDD:293791 15/39 (38%)
WD40 repeat 1167..1252 CDD:293791 14/84 (17%)
WD40 repeat 1258..1294 CDD:293791 7/35 (20%)
wdsNP_524984.1 WD40 <63..361 CDD:441893 73/342 (21%)
WD40 repeat 75..112 CDD:293791 8/36 (22%)
WD40 repeat 118..154 CDD:293791 16/41 (39%)
WD40 repeat 159..195 CDD:293791 14/84 (17%)
WD40 repeat 202..237 CDD:293791 7/37 (19%)
WD40 repeat 244..280 CDD:293791 13/45 (29%)
WD40 repeat 288..325 CDD:293791 1/3 (33%)
WD40 repeat 331..357 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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