DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10132 and nwd1

DIOPT Version :10

Sequence 1:NP_609979.2 Gene:CG10132 / 35239 FlyBaseID:FBgn0032798 Length:1361 Species:Drosophila melanogaster
Sequence 2:XP_002934424.2 Gene:nwd1 / 100492543 XenbaseID:XB-GENE-985040 Length:1615 Species:Xenopus tropicalis


Alignment Length:1563 Identity:299/1563 - (19%)
Similarity:523/1563 - (33%) Gaps:540/1563 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GNLSVLQGKPPPGRKIERDKKIVVYILADNSTEYKKHKRVVHSLYKHFKSKCQSRGFDFIIADVH 179
            |...:|:|| ......|....:.::|.:..|...::...::...|...::.||..|..|.:.|: 
 Frog     5 GFKDILRGK-ETSLPTEPSNTVRLFISSTFSDMAEERNALMEFAYPDIQAFCQKHGLGFEVVDM- 67

  Fly   180 DSEPETEPGNGNARKDFSRLQEAKRWTQTPLEAQGGHEEAANCLCEI---TRHSAGAYMIPVLFL 241
                                    ||..... |...|.....||.||   .:.|.|...|.:  :
 Frog    68 ------------------------RWGVRDY-ATVDHRTKELCLKEIDFCQKTSMGPSFIAL--V 105

  Fly   242 GATLGTPMLPLTIESQDFTSVLG--TASEEERLLLEKWY-----TIDNSY--QPM-CHRLHAQQV 296
            |...|...:|..|..::|..:..  .::|.:..||.||:     ||..:|  ||: .|..|....
 Frog   106 GNRYGFRPIPRVISEEEFNILFSKIQSNESDAQLLTKWFWKDMNTIPPTYVLQPITTHLPHYAAT 170

  Fly   297 DPYSSQVNGE-----------------LNELLAVLLRLFSDDVKDSYLTTVVEQEINNTVLMSQE 344
            :|..:::..:                 |..|.|.:..|.:.:.|..|..:|.|.||...:|    
 Frog   171 NPSFAELQAQEYKEWRNTEKQLTKALRLAALEAQIEGLITLEQKHKYFKSVTESEIECGLL---- 231

  Fly   345 LAKRCIWIQTGSQV-ARPSENASPLE----LEVQR------RLSHVYSGLKSQL--SEKNLIRL- 395
               .|...:.||.: .|..::.:..:    |:|:.      ....:...||:::  ..|:.::. 
 Frog   232 ---ACGANKEGSTIFLREVKDLNQCQISGLLDVREDGSTDTEAQDLLQNLKNRILTDHKDCVKTH 293

  Fly   396 LPTMSILDEELSAVIESLLDKTLAGIFEEHQQKNSIPYNTLGVDRV---------LLEELRLVGH 451
            :..|||...:: |.:..|.|:.:|.:  .||....:|....|..:.         |.:|  ::.|
 Frog   294 VVEMSIQKNKM-AYLHKLCDQAIAVV--NHQILKCLPSGNAGQSQSENQHPWLGWLRQE--VIHH 353

  Fly   452 YSKLLAQN---SANFDIMNDVKRYIRDSTAQ---PLVVSGARGSGKSVLVSKIMENVHRWKPEAQ 510
            .|....::   |...|::..:..||::..:|   ||::.|..||||:.|:.|..|.:.:....:.
 Frog   354 LSSSQKKSQVFSGRQDLLQKIMSYIQERHSQVYPPLIIHGVSGSGKTALMCKAFEMLKQTNNGSS 418

  Fly   511 L-ILRYANLSARSSDLTSLLGSMANQMSVLETGHQCQVP---------HTLEGYSRVIREILDRQ 565
            | :||....|.:||::..:|.|:..|:.:   ..:.|.|         .|:..:.:::..:.:|:
 Frog   419 LMVLRLLGTSPQSSEIHDVLKSICYQLCI---ALELQPPSSQITNIYNETVRFFHQLLTTVSERK 480

  Fly   566 QRFFVLIIDGVDELQRDE---LLDWLPQQLGSAKMILTVSELADEGEDVDGTEAGDSFDMLAALA 627
            ....||..|.:|:|...|   .|.|||::. .|.:.:.||.|.:||            .:|..|.
 Frog   481 VENLVLFFDSLDQLSPSEGAHRLHWLPKEC-PANVCIVVSTLPEEG------------GILKTLK 532

  Fly   628 QLGIPQRCFLRLRQFTERQWHD----ILSSGG------------GDFYAANG--ALKLPDD---- 670
            .......|::.::..:..|...    :::|.|            |.|.....  .|||..|    
 Frog   533 DSVTDPECYIEVKPLSAEQGSQMIEMLMASAGRRLTNDQQEIVLGSFRKCGQPLLLKLAFDEAKR 597

  Fly   671 WKT--------------------------LHGK-TPYHAKSLWWLAWLGHVAQPIS-----EIGD 703
            |.:                          |||| ...||        ||::....|     |:.|
 Frog   598 WSSYTPITELMIATSTKEAVSLLYQCLEQLHGKLLVSHA--------LGYIVASRSGLSEAELKD 654

  Fly   704 ISSRILQVLESKF------ATDQVELLLLIVRLSPWGIRESDCLGVFQKMTQLEAQVAFKVWSKF 762
            |.|...:||...:      :.|.:....|     ||....:|..|..     :|.|..       
 Frog   655 ILSLDDEVLADIYQYWAPPSNDLIRFPTL-----PWTRLRNDLEGYL-----VERQAD------- 702

  Fly   763 CWLMGPMLLGLKN---IRIA--------DKSFGRAVLARYAQKQW-----------LVHEALRDY 805
                |..:|||.:   |.:|        :||.....||.|...:|           |::::|.  
 Frog   703 ----GSTVLGLYHRQFIEVARDTYLTNTEKSNRHGTLADYFMGKWSMGTKRPILLPLINKSLN-- 761

  Fly   806 FDRQDSEFKGSQGANTYNYQKYLKLPYHHFCAVIEDNPAPHKIDILFNCFYFTDLQ--------W 862
            .||:.:........|..|.:|..:||||                 |.|.....:||        |
 Frog   762 ADRKVASQPLWFSDNMPNRRKMSELPYH-----------------LLNAGCIDELQGEILGNMDW 809

  Fly   863 IANKVHATGPEHLLNDILQAEWLAKSGGENCPTAYVHICFLKQFLEQYLHELSY-----DGQQFY 922
            |::|:.:.|.:.::.|...:..|..|.         .|..|:..|..:...:::     |....:
 Frog   810 ISSKIVSCGIQSVIKDFEMSVKLISSR---------EIMLLRDTLRLFQPTINFIEGVIDPVIVF 865

  Fly   923 TLM---KYYLKTRFREAPELKDDEKIRSW-WEYTNELEFAFLEILNADLDAENGNQAEQEKPSDD 983
            |.|   .::.:..:|...||  .::...| .:|.:                              
 Frog   866 TEMLARMHFFQLSYRLIDEL--CQQCTGWLHQYPH------------------------------ 898

  Fly   984 AVPSSVPVKGYDVLMNLPQP--------------GCYVASMCTDR------SE---ICIWDVKN- 1024
              |:.:|..|:.      ||              |..|..:|.|.      ||   :.:|::|: 
 Frog   899 --PTFIPTCGFF------QPPGGPLQTTVTGFKKGVTVMELCPDHDLLVVGSEDGIMIVWNIKDI 955

  Fly  1025 --------------CCRI-----RELQGIQQPTAM------------------------------ 1040
                          |.::     |.:.|....|.:                              
 Frog   956 EVIHTLTGHNDGIRCIKMFEKGTRAVSGSLDHTLLLWNLVTGKQYLCIHEDHTTYENAYLHVDEK 1020

  Fly  1041 --------------------CPVGN---------YEAAVLCRREIRVINLDEGKFKV------TL 1070
                                .|:.|         .:|||.|..::.:...:.|...:      .|
 Frog  1021 NSIIYSAAGSQVYAWKIESGAPLLNLSPGVPNFPLQAAVFCAHQLLITVTEGGTVHLWDSATGEL 1085

  Fly  1071 KGVMNQKMPYFGLHDQNHLVC---LSRN-RMYVNLMN-----LESGDCVTT-------------- 1112
            ||  ::::|..|..|.|. ||   :.|: :|.|...|     :.||..|:|              
 Frog  1086 KG--SRQLPGVGGEDANP-VCSCFIPRHGKMVVGFENGFLAVISSGGGVSTEKMSSAVVFVVPSE 1147

  Fly  1113 ----FKAG-------------------------EDRFLNSLLVSGDGRILVCG--DETQKPFPLL 1146
                |.||                         || |:.|::::....|::.|  |||     :.
 Frog  1148 DESLFAAGFGKQVQIFRADSNALRTFLDSPLEHED-FVKSVVINNGRNIILTGSQDET-----IR 1206

  Fly  1147 VWHLSQRKLLYDLRIPHHDFITSLSAITHEGSYVCVVAKELNEPTTPNFIVVYDLQSGTLFKKWK 1211
            :|.||.|..|.|........:|||:  .|.|:   :::...|......:.:.||.|..||     
 Frog  1207 IWSLSHRGTLLDTFYGMGVSVTSLA--LHGGT---LISSSKNAYYLKLWTLDYDQQHKTL----- 1261

  Fly  1212 PACNTVSLAISQVNACVIAGLEDA-------------KILIWDLVTGNCKSTLIGHNAPVTFLKL 1263
                   ....:.:.||  .|.||             ||::||...|. .:.::..:|.|..|::
 Frog  1262 -------TPFQERSGCV--ALSDAGNRVYFPKTGDKHKIVVWDSKQGR-MADIVEASAEVKCLEV 1316

  Fly  1264 DPLGKVLLSYDKEGRDSAVRMWELNSAKSLAVFKPPAQVSTCEILPNGAFVVLALKDRNSLLTLA 1328
            ....::|......|   .|..:.|:..:.:|...||..        |...|.|:|..:.:.|.:|
 Frog  1317 AENSRILFVGLTSG---TVLAFPLDQKQDVACIPPPGN--------NMEVVCLSLSKQENRLAVA 1370

  Fly  1329 LKN 1331
            ..|
 Frog  1371 YHN 1373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10132NP_609979.2 AAA_22 474..599 CDD:379165 35/140 (25%)
WD40 repeat 1039..1072 CDD:293791 8/97 (8%)
WD40 <1042..1321 CDD:441893 77/360 (21%)
WD40 repeat 1079..1114 CDD:293791 14/61 (23%)
WD40 repeat 1122..1160 CDD:293791 12/39 (31%)
WD40 repeat 1167..1252 CDD:293791 21/97 (22%)
WD40 repeat 1258..1294 CDD:293791 6/35 (17%)
nwd1XP_002934424.2 DUF4062 26..122 CDD:463823 23/123 (19%)
NACHT 386..>739 CDD:444362 85/397 (21%)
WD40 <907..1295 CDD:441893 74/421 (18%)
WD40 repeat 926..963 CDD:293791 7/36 (19%)
WD40 repeat 969..1012 CDD:293791 4/42 (10%)
WD40 repeat 1055..1092 CDD:293791 8/38 (21%)
WD40 1122..1517 CDD:441893 60/289 (21%)
WD40 repeat 1140..1179 CDD:293791 3/38 (8%)
WD40 repeat 1184..1208 CDD:293791 6/28 (21%)
WD40 repeat 1262..1306 CDD:293791 10/46 (22%)
WD40 repeat 1311..1347 CDD:293791 7/38 (18%)
WD40 repeat 1356..1390 CDD:293791 6/18 (33%)
WD40 repeat 1401..1438 CDD:293791
WD40 repeat 1444..1482 CDD:293791
WD40 repeat 1489..1513 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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