DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hasp and Csmd1

DIOPT Version :10

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:XP_036010291.1 Gene:Csmd1 / 94109 MGIID:2137383 Length:3600 Species:Mus musculus


Alignment Length:1911 Identity:394/1911 - (20%)
Similarity:580/1911 - (30%) Gaps:651/1911 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 KPDRECPELAQPSLGQVTVAGRHF--GARASYACPHGYHVVGLQSRLC--QADG--NWAGAEPAC 174
            ||...|.:......|  |..|..|  |:..:|.|..||.:|...|..|  .|||  :|..|.|||
Mouse  1595 KPREACFDPGNIMNG--TRIGTDFKLGSTVTYQCDSGYKIVDPSSIECVTGADGKPSWDRALPAC 1657

  Fly   175 ---------------------------KQNIYCLKPP-------QIEHARNSALPEQETFD---- 201
                                       :..||.:..|       |..:.:.:.....|.||    
Mouse  1658 QAPCGGQYTGSEGVVLSPNYPHNYTAGQMCIYSITVPKEFVVFGQFAYFQTALNDLAELFDGTHP 1722

  Fly   202 ----LDS------------------TVQYHCHTGYVTNGFPRAKCLAIDNLASWYGPDIQCEPRS 244
                |.|                  .:::...:|....||...               .|..||:
Mouse  1723 QARLLSSLSGSHSGETLPLATSNQILLRFSAKSGASARGFHFV---------------YQAVPRT 1772

  Fly   245 ----CGQPPDPAYGWHAGECYTYGCKITYNCGTGYELVGKHERYCQSD----GSWTPKELPTCVL 301
                |...|:|.||...|..::.|..:.:.|..||.|.|.....|||.    ..|. ..:|:||:
Mouse  1773 SDTQCSSVPEPRYGRRIGSEFSAGSIVRFECNPGYLLQGSTAIRCQSVPNALAQWN-DTIPSCVV 1836

  Fly   302 VTS-------------------------------------------------------------- 304
            ..|                                                              
Mouse  1837 PCSGNFTQRRGTILSPGYPEPYGNNLNCVWKIIVSEGSGIQIQVISFATEQNWDSLEIHDGGDMT 1901

  Fly   305 -----------------------------------------------VVCPTPENPKNGKATYTT 322
                                                           ..|..|..|.||......
Mouse  1902 APRLGSFSGTTVPALLNSTSNQLCLHFQSDISVAAAGFHLEYKTVGLAACQEPALPSNGIKIGDR 1966

  Fly   323 LAYNSVVSYECRYGYTLVGESSSRC--GADRKWSGTLPTCKEINCGHPGVLYNGWIENIEAGTGL 385
            ...|.|:|::|..||||.|.|...|  |..|:|:...|.| ...||  |.|           |.:
Mouse  1967 YMVNDVLSFQCEPGYTLQGRSHISCMPGTVRRWNYPSPLC-IATCG--GTL-----------TSM 2017

  Fly   386 GASIIFRCQPEMMINGLGSSVCQIDGRWRNALPECLAPCVVPTISQG-NVYPIEIITDENGTTIV 449
            ...|:....|       ||....:|..|:.:||          |..| ::..:...|:.|...:.
Mouse  2018 SGVILSPGFP-------GSYPNNLDCTWKISLP----------IGYGAHIQFLNFSTEANHDYLE 2065

  Fly   450 HPPTTTTQSPTQTQSIG-----GVEKVKHGTALEVKCDENYE---FPVSLLSPPTCNNGTWSIIP 506
            ........||...|..|     .:....|.|.:....|.:..   |.:|..:             
Mouse  2066 IQNGPYHSSPMMGQFSGPDLPTSLLSTTHETLIRFYSDHSQNRQGFKLSYQA------------- 2117

  Fly   507 RCVPARCKSMPRPP--KHGMVMAPKTEHGMKARFKCKDGFKLVSPEGKDVTDPHDYVLTCSFG-- 567
                ...::.|.||  ::|.::......|....|:|..|:.|:.         |. ||||..|  
Mouse  2118 ----YELQNCPDPPAFQNGFMINSDYSVGQSISFECYPGYILLG---------HP-VLTCQHGTD 2168

  Fly   568 -NWTGETPKCDEVFCSFPGYIPNGKVLLVGNMGLYDYRPYVKKIVNNKQIMYDCDKGYVLEVGPP 631
             ||....|:||.. |.:.....||.:.   :.|..|..|.:|          ||   ..|...||
Mouse  2169 RNWNYPFPRCDAP-CGYNVTSQNGTIY---SPGFPDEYPILK----------DC---LWLVTVPP 2216

  Fly   632 GATCVGGKWRPLDLPQCLLGQHPRLRWNRRRRRSLQIRQLRSMYLLQRQRQLQRQLI-------D 689
            |    .|.:....|.|..........|:...:.|.|:........|:.......|::       .
Mouse  2217 G----HGVYINFTLLQTEAVNDYIAVWDGPDQNSPQLGVFSGNTALETAYSSTNQVLLKFHSDFS 2277

  Fly   690 NQNYIKAIADPVQPSVHRVKRSASPHPNSQPYA----SDVDRAYSKYYQKIKERYQRYV-RKMLG 749
            |..:...       :.|..:....|.|.:.|.|    .|.|.....:.     :||.:. ..:||
Mouse  2278 NGGFFVL-------NFHAFQLKRCPPPPAVPQADLLTEDEDFEIGDFV-----KYQCHPGYTLLG 2330

  Fly   750 RDRIYQRLHSQ---------DAVGRVGNNLNTHDGGQVTMRG-----------------KSNF-- 786
            .|.:..:|.||         .......|.:.|...|.:...|                 :.||  
Mouse  2331 SDTLTCKLSSQLLFQGSPPTCEAQCPANEVRTESSGVILSPGYPGNYFNSQTCAWSIKVEPNFNI 2395

  Fly   787 ----------REFENGNNYLGSGGIGSGGVVGSGVVALPNINQASRNHQVHVNRTPKEELLSNGS 841
                      ::|:....:.||.|.....||.||            ||....|.|          
Mouse  2396 TLFVDTFQSEKQFDALEVFDGSSGQSPLLVVLSG------------NHTEQSNFT---------- 2438

  Fly   842 PPIASRSLHLNATRSYIEQLKSQIVRRRRRRSSSIGQSPPPSGATIPDAEVDISDGGEAGKGGG- 905
                |||.||        .|:........::...|..:.|....|     ..:.:||...|..| 
Mouse  2439 ----SRSNHL--------YLRWSTDHATSKKGFKIRYAAPYCSLT-----STLRNGGILNKTAGA 2486

  Fly   906 -----------GKRL---------RGPCEELEWDSFANV-TTVRPG--KVPGRNA-------VGI 940
                       |.|:         |.|....:|||.|.: ..|..|  :.||..:       :..
Mouse  2487 VGSKVHYFCKPGYRMIGHSNATCRRNPVGVYQWDSMAPLCQAVSCGIPEAPGNGSFTGNEFTLDS 2551

  Fly   941 MLHLECNAGFKLNIKGENATARCIRGIW----KPETPKCLSAPCLVPAVEHGQYYKVEPHTKQLS 1001
            .:..|||.||||:...|..|.....|:|    ||  |.|...||  |::| ||   :..|.....
Mouse  2552 KVTYECNEGFKLDASQEATTVCQEDGLWSNRGKP--PTCKPVPC--PSIE-GQ---LSEHVLWRL 2608

  Fly  1002 DKPSLTPLSTYEEIQSNEF---ITLECEDGFNIQGSAQLRC-AHGSWSVNA-FSECTSVPCTLPN 1061
            ...||           ||:   :.|.|..|:.:||...|:| |:|:||... ...|..:.|...:
Mouse  2609 VSGSL-----------NEYGAQVLLSCSPGYFLQGQRLLQCQANGTWSTEEDRPRCKVISCGSLS 2662

  Fly  1062 IPGVIYDGGYRAGLTIGHGSSVSVRCELSTNANPIEMSCH------KGILTPPSIPCESGLRKSR 1120
            .|    ..|.:.|....:|::....|    |.....:..|      .|:.:.....|.:|     
Mouse  2663 FP----PNGNKIGTLTIYGATAIFTC----NTGYTLVGSHVRECLANGLWSGSETRCLAG----- 2714

  Fly  1121 EELEHATPTPHPKVEHNELDNDHDHHDNGTDEHDDMKMCGPPMLTDGALVYKNADHPELDGAYES 1185
                |. .:|.|.|      |.|...|..:.....:..|.|                   |....
Mouse  2715 ----HC-GSPDPIV------NGHISGDGFSYRDTVVYQCNP-------------------GFRLV 2749

  Fly  1186 GTEIFFNCIPNAAGDRQTWRIICDNGLWIGRSYNCENGTCVFRNNEANVVSFYNDLEIR-EDVVD 1249
            ||.:               ||...:..|.|::..|...||....|.|:.::  |..|.. .|:|:
Mouse  2750 GTSV---------------RICLQDHKWSGQTPVCVPITCGHPGNPAHGLT--NGTEFNLNDLVN 2797

  Fly  1250 FPPGATIISRCMDIGKFSFMGSHERTC-IHSEWTNTKPVCSGLNQENDYAMEKAPTILFRHQNGP 1313
            |        .|..  .:...|:....| .:.:|::..|:|..:|..:..::|.|    .||    
Mouse  2798 F--------TCHT--GYRLQGASRAQCRSNGQWSSPLPICRVVNCSDPGSVENA----VRH---- 2844

  Fly  1314 IAQSNDGKLIVYPGTTLHMEC------------------LWMRRF--------GNP--KWNVSHT 1350
             .|.|..:...| ||::...|                  ||.|..        |:|  ..|...|
Mouse  2845 -GQQNFPESFEY-GTSVMYHCKTGFYLLGSSALTCMASGLWDRSLPKCLAISCGHPGVPANAVLT 2907

  Fly  1351 HKNYTEGWVTEADEGRDSTLEYRL----------------------SIVDAASDDSGFYSCMTPA 1393
            .:.:|.|          :|::|..                      |:...:.:..||  |..|.
Mouse  2908 GELFTYG----------ATVQYSCKGGQILTGNSTRVCQEDSHWSGSLPHCSGNSPGF--CGDPG 2960

  Fly  1394 RHEHTVEVVVRAINCPEIPMRRGLIVNTNDTKLSTRALL--SCANGNSLIGASELFCLPSGNWSA 1456
            ...|              ..|.|       .:..|::||  ||..|:.|.|::|..||.:|:||.
Mouse  2961 TPAH--------------GSRLG-------DEFKTKSLLRFSCEMGHQLRGSAERTCLVNGSWSG 3004

  Fly  1457 PLPVCESVECGDIPLGMGSNASSPRVSVLSREVG----GRAAFSCASGYGLRGPAEAICNPTGEW 1517
            ..||||:|.||        |..:|...::....|    ....::|..||...|.....|...|.|
Mouse  3005 VQPVCEAVSCG--------NPGTPTNGMILSSDGILFSSSVIYACWEGYKTSGLMTRHCTANGTW 3061

  Fly  1518 SAPLPTCVEVQCDNPGAPQNGYAQGSAPYRAGDVVQFNCNPEYMMQ--GQPIIACQDNARWSGGL 1580
            :...|.|..:.|.:||...||...|: .:.....|.:.|||.|:|:  ..|.|.|..:..|:...
Mouse  3062 TGTAPDCTIISCGDPGTLPNGIQFGT-DFTFNKTVSYQCNPGYLMEPPTSPTIRCTKDGTWNQSR 3125

  Fly  1581 PKC-VQACSYPGTVISGRMSSVKFYYAIGESITFTCDAGLDLRGSKVLKCLKNGKWSSAIPTCVT 1644
            |.| ...|:.|..|.:|::....|.:  |.||:::|..|..|..|.:|.|...|.|...:|.|: 
Mouse  3126 PLCKAVLCNQPPPVPNGKVEGSDFRW--GASISYSCVDGYQLSHSAILSCEGRGVWKGEVPQCL- 3187

  Fly  1645 NEGPVGGGGGGGGGGGGGSGSVATNK 1670
               ||..|..|....|..||...|.|
Mouse  3188 ---PVFCGDPGTPAEGRLSGKSFTFK 3210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 CCP 121..175 CDD:153056 21/86 (24%)
PHA02927 182..421 CDD:222943 67/390 (17%)
PHA02927 <497..>654 CDD:222943 36/161 (22%)
PHA02927 <946..1111 CDD:222943 46/179 (26%)
CCP 1408..1462 CDD:153056 18/55 (33%)
PHA02927 <1488..1643 CDD:222943 45/161 (28%)
Csmd1XP_036010291.1 CUB 68..175 CDD:238001
CCP 181..238 CDD:214478
CUB 244..347 CDD:238001
CCP 385..443 CDD:153056
CUB 447..556 CDD:238001
CCP 563..617 CDD:153056
CUB 620..727 CDD:238001
CCP 733..791 CDD:153056
CUB 794..901 CDD:238001
CCP 909..962 CDD:153056
CUB 966..1073 CDD:238001
CCP 1081..1137 CDD:153056
CUB 1140..1247 CDD:238001
CCP 1253..1310 CDD:153056
CUB 1313..1421 CDD:238001
CCP 1427..1484 CDD:153056
CUB 1487..1592 CDD:238001
CCP 1600..1658 CDD:153056 20/59 (34%)
CUB 1661..1768 CDD:238001 12/121 (10%)
CCP 1777..1835 CDD:153056 17/58 (29%)
CUB 1838..1943 CDD:238001 1/104 (1%)
CCP 1951..2007 CDD:153056 21/56 (38%)
CUB 2010..2117 CDD:238001 26/136 (19%)
CCP 2123..2178 CDD:214478 18/64 (28%)
CUB 2182..2288 CDD:238001 22/132 (17%)
CCP 2294..2352 CDD:153056 14/62 (23%)
CUB 2359..2465 CDD:238001 24/139 (17%)
PHA02927 <2488..2653 CDD:222943 49/183 (27%)
PHA02927 2655..2891 CDD:222943 57/315 (18%)
CCP 2895..2948 CDD:153056 9/62 (15%)
PHA02927 <2976..3128 CDD:222943 49/160 (31%)
PHA02927 3068..3307 CDD:222943 46/150 (31%)
CCP 3311..3367 CDD:153056
Blue background indicates that the domain is not in the aligned region.

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