DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hasp and c4bpa

DIOPT Version :10

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:XP_012819516.1 Gene:c4bpa / 733533 XenbaseID:XB-GENE-1014581 Length:482 Species:Xenopus tropicalis


Alignment Length:486 Identity:125/486 - (25%)
Similarity:199/486 - (40%) Gaps:80/486 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 CLKPPQIEHARNSALPEQETFDLDSTVQYHCHTGYVTNGFPRAKCLAIDNLASWYGPDIQCEPRS 244
            |..||:::.|  .....|.:|.:.:.|:|.|..||:...........:.| ::|..||:.|:.||
 Frog    30 CDFPPRLQDA--DLKTTQNSFTIGTVVEYVCRPGYLKIPGRNTTITCLSN-STWSTPDVFCKLRS 91

  Fly   245 CGQPPDPAYGWHAGECYTYGCKITYNCGTGYELVGK-HERYCQSDGSWTPKELPTCVLVTSVVCP 308
            ||.|.|...|....|.:.:|..:.|.|..||.::.| :.|.||:||:|: ..:|.|   .:.:|.
 Frog    92 CGNPGDTLNGEFHAEDFNFGSVVNYTCNVGYNMISKFNYRICQTDGTWS-NAVPQC---EAQICS 152

  Fly   309 TPENPKNG--KATYTTLAYNSVVSYECRYGYTLVGESSSRCGADRKWSGTLPTCKEINCGHPGVL 371
            .|||..||  ..|.....|...|:|:|.....|||:||..|.....||..:|.||.:||.:|.|.
 Frog   153 PPENILNGSFNPTKDEYYYQDSVTYKCINNLVLVGKSSMFCTEFGNWSSAVPHCKGVNCANPDVP 217

  Fly   372 YNGWIENIEAGTGLGASIIFRCQPEMMINGLGSSVCQIDGRWRNALPECLAPCVVPTISQGNVYP 436
            .:..:........|.::|.|:|.....|.|..:..|.||.:|..:||:||..|       |:  |
 Frog   218 NSKRLSGFSGPYTLNSAITFKCNDGFDIFGQSTIECNIDSQWEPSLPQCLGRC-------GS--P 273

  Fly   437 IEIITDENGTTIVHPPTTTTQSPTQTQSIGGVEKV--KHGTALEVKCDENYEFPVSLLSPPTCNN 499
            ..::..|.....|...|.::.:..|...:.|...:  |:.|.:                   |::
 Frog   274 PSLLYAELKPDFVDQKTFSSGAEVQYACLIGYNPISGKNSTII-------------------CHD 319

  Fly   500 GTWSIIPRCVP-ARCKSMPRPPKHGMV---MAPKTEHGM---KARFKCKDGFKLVSPEGKDVTDP 557
            .|||     .| ..|.|...||...:|   ..|:.:..:   ...::|.:..::|.       ||
 Frog   320 ATWS-----TPDVFCTSQICPPPENIVNGSFIPQKDQYLYKESVTYQCFNNMEIVG-------DP 372

  Fly   558 HDYVLTC-SFGNWTGETPKCDE---VFCSFPGYIPNGKVLLVGNMGLYDYRPYVKKIVNNKQIMY 618
            ..:   | :.|.|:...|.|::   ..|..|..|.||..:           |...:.:..:.:.|
 Frog   373 SRF---CTATGKWSSVVPSCNDSSAQICPPPENIVNGHFI-----------PQKDQYLYKESVTY 423

  Fly   619 DCDKGYVLEVGPPGATCVG-GKWRPLDLPQC 648
            .|.....: ||.|...|.. |||..: :|.|
 Frog   424 QCFNNTKI-VGDPSRFCTATGKWSSI-VPSC 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 CCP 121..175 CDD:153056
PHA02927 182..421 CDD:222943 75/241 (31%)
PHA02927 <497..>654 CDD:222943 37/164 (23%)
PHA02927 <946..1111 CDD:222943
CCP 1408..1462 CDD:153056
PHA02927 <1488..1643 CDD:222943
c4bpaXP_012819516.1 PHA02927 30..267 CDD:222943 76/243 (31%)
CCP 334..389 CDD:153056 12/64 (19%)
CCP 397..452 CDD:153056 16/67 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.