DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hasp and Sele

DIOPT Version :9

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:NP_035475.1 Gene:Sele / 20339 MGIID:98278 Length:619 Species:Mus musculus


Alignment Length:632 Identity:136/632 - (21%)
Similarity:193/632 - (30%) Gaps:228/632 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1038 RCAHGSWSVNAFSECTSVPCTLPNIPGVIYDGGYRAGLTIGHGSSVSVRCELSTNANPIEMSCHK 1102
            ||.....::...:.||:..|:                   |||..:.       ..|.....||.
Mouse   136 RCNKKKLALCYTASCTNASCS-------------------GHGECIE-------TINSYTCKCHP 174

  Fly  1103 GILTPPSIPCESGLRKSREELEHATPTPHPKVEHNELDNDHDHHDNGTDEHDDMKMCGPPMLTDG 1167
            |.|.|   .||..:            |..|:                  ||.|.          |
Mouse   175 GFLGP---NCEQAV------------TCKPQ------------------EHPDY----------G 196

  Fly  1168 ALVYKNADHPELDGAYESGTEIFFNCIPNAAGDRQTWRIICDNGLWIGRSYNCENGTCVFRNNEA 1232
            :|   |..||....:|.|      :|                       |:.|:.|.        
Mouse   197 SL---NCSHPFGPFSYNS------SC-----------------------SFGCKRGY-------- 221

  Fly  1233 NVVSFYNDLEIREDVVDFPPGATIISRCMDIGKFSFMGSHERTCIHSEWTNTKPVCSGLNQENDY 1297
                             .|.......||...|               ||:...|.|..:..|   
Mouse   222 -----------------LPSSMETTVRCTSSG---------------EWSAPAPACHVVECE--- 251

  Fly  1298 AMEKAPTILFRHQNGPI--AQSNDGKLIVYPGTTLHMECLWMRRFGNPKWNVSHTHKNYTEGWVT 1360
                    ...|....|  ..||.|.   ||                  ||.:.|. :..||:  
Mouse   252 --------ALTHPAHGIRKCSSNPGS---YP------------------WNTTCTF-DCVEGY-- 284

  Fly  1361 EADEGRDSTLEYRLSIVDAASDDSGFYSCMTPARHEHTVEVVVRAINCPEIPMRRGLIVNTNDTK 1425
                       .|:...:.....||.:...||:         .:|:.|..||..:...|:.:.:.
Mouse   285 -----------RRVGAQNLQCTSSGIWDNETPS---------CKAVTCDAIPQPQNGFVSCSHST 329

  Fly  1426 LSTRALLS-----CANGNSLIGASELFCLPSGNWSAPLPVCESVECGDIPLGMGSN------ASS 1479
            ....|..|     |....:|.|.:::.|...|.|:..:|||::|:|..:......|      ||.
Mouse   330 AGELAFKSSCNFTCEQSFTLQGPAQVECSAQGQWTPQIPVCKAVQCEALSAPQQGNMKCLPSASG 394

  Fly  1480 PRVSVLSREVGGRAAFSCASGYGLRGPAEAICNPTGEWSAPLPTCVEVQCDNPGAPQNGYAQ--- 1541
            |      .:.|....|||..|:.|:|.....|.|.|||.:..|||..|:||:...||||..:   
Mouse   395 P------FQNGSSCEFSCEEGFELKGSRRLQCGPRGEWDSKKPTCSAVKCDDVPRPQNGVMECAH 453

  Fly  1542 ---GSAPYRAGDVVQFNCNPEYMMQGQPIIACQDNARWSGGLPKCVQACSYPGTVISGRMS-SVK 1602
               |...|::.  ..|.||..:.:.|...:.|....:|:..:|.| |....|...:.|:|: |..
Mouse   454 ATTGEFTYKSS--CAFQCNEGFSLHGSAQLECTSQGKWTQEVPSC-QVVQCPSLDVPGKMNMSCS 515

  Fly  1603 FYYAIGESITFTCDAGLDLRGSKVLKCLKNGKWSSAIPTCVTNEGPV 1649
            .....|....|||.....|.||.||.|...|:||...|||   |.||
Mouse   516 GTAVFGTVCEFTCPDDWTLNGSAVLTCGATGRWSGMPPTC---EAPV 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 PHA02927 114..360 CDD:222943
CCP 121..175 CDD:153056
CCP 180..241 CDD:153056
CCP 245..300 CDD:153056
CCP 307..361 CDD:153056
CCP 365..420 CDD:214478
PHA02927 <497..>654 CDD:222943
Sushi 515..576 CDD:278512
PHA02927 <946..1111 CDD:222943 14/72 (19%)
CCP 1408..1462 CDD:153056 14/58 (24%)
CCP <1488..1525 CDD:153056 14/36 (39%)
CCP 1529..1584 CDD:153056 15/60 (25%)
CCP 1587..1643 CDD:153056 19/56 (34%)
SeleNP_035475.1 CLECT_selectins_like 29..147 CDD:153062 2/10 (20%)
EGF_CA <155..182 CDD:238011 10/55 (18%)
CCP 187..245 CDD:153056 22/157 (14%)
PHA02927 269..496 CDD:222943 65/278 (23%)
CCP 501..556 CDD:153056 20/57 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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