DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hasp and Cfh

DIOPT Version :9

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:NP_569093.2 Gene:Cfh / 155012 RGDID:620428 Length:1235 Species:Rattus norvegicus


Alignment Length:1683 Identity:333/1683 - (19%)
Similarity:523/1683 - (31%) Gaps:665/1683 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 EDCKSKKKKCLCDGVCGNSCIKPDRECPELAQPSLGQVTVAGRHFGARASYACPHGYHVVGLQSR 159
            ||||.                .|.||..|:...|..:...:.   |.:|:|.|..||..:|...:
  Rat    19 EDCKG----------------PPPRENSEILSGSWSEQLYSE---GTQATYKCRPGYRTLGTIVK 64

  Fly   160 LCQADGNWAGAEPACKQNIYCLKPPQIEHARNSALPEQETFDLDSTVQYHCHTGYVTNGFPRAKC 224
            :|: :|.|..:.|                               |.:                  
  Rat    65 VCK-NGEWVPSNP-------------------------------SRI------------------ 79

  Fly   225 LAIDNLASWYGPDIQCEPRSCGQPPDPAYG---WHAGECYTYGCKITYNCGTGYELVGKHE-RYC 285
                           |..|.||.|.|..:|   ...|..:.:|.|:.|.|..||:|:|:.: |.|
  Rat    80 ---------------CRKRPCGHPGDTPFGSFRLAVGSEFEFGAKVVYTCDEGYQLLGEIDYREC 129

  Fly   286 QSDGSWTPKELPTCVLVTSVVCPTPENPK--NGKATYTTLAY-NSVVSYECRYGYTLVGESSSRC 347
            .:|| || .::|.|.:|..:.....||.:  :|.|......| ..||.:||..|:.:.|:....|
  Rat   130 DADG-WT-NDIPICEVVKCLPVTELENGRIVSGAAEPDQEYYFGQVVRFECNSGFKIEGQKEMHC 192

  Fly   348 GADRKWSGTLPTCKEINCGHPGVLYNGWIENIEAGTGLGASII--------FRCQPEMMINGLGS 404
            ..:..||...|.|.||:|..|         .:|.|.|:....:        ::|:...:....|.
  Rat   193 SENGLWSNEKPQCVEISCLPP---------RVENGDGIYLKPVYKENERFQYKCKQGFVYKERGD 248

  Fly   405 SVCQIDGRWRNALPEC-LAPCVVPTISQGNVYPIEIITDENGTTIVHPPTTTTQSPTQTQSIGGV 468
            :||...| | |..|.| ...|:.|.|..|                ::.|                
  Rat   249 AVCTGSG-W-NPQPSCEEMTCLTPYIPNG----------------IYTP---------------- 279

  Fly   469 EKVKHGTALEVKCD-ENYEFPVSLLSPPTCNNGTWSIIPRCVPARCKSMPRPPKHGMVMAPKTEH 532
            .::||....|::.: :|..:|.:......|....|...|||....| ..|: .|||.:...::..
  Rat   280 HRIKHRIDDEIRYECKNGFYPATRSPVSKCTITGWIPAPRCSLKPC-DFPQ-FKHGRLYYEESRR 342

  Fly   533 -------GMKARFKCKDGFKLVSPEGKDVTDPH----DYVLTCSFGNWTGETPKCDEVFCSFPGY 586
                   |.:..:.|.:||          |.|.    || |.|:...|..|.|...:  |.| .|
  Rat   343 PYFPVPIGKEYSYYCDNGF----------TTPSQSYWDY-LRCTVNGWEPEVPCLRQ--CIF-HY 393

  Fly   587 IPNGKVLLVGNMGLYDYRPYVKKIVNNKQIMYDCDKGYVLEVGPPGATCVGGKWRPLDLPQCLLG 651
            :..|:       .||..|.|::    .:.....|..||.|..|.....|....|.|  .|:|:  
  Rat   394 VEYGE-------SLYWQRRYIE----GQSAKVQCHSGYSLPNGQDTILCTENGWSP--PPKCV-- 443

  Fly   652 QHPRLRWNRRRRRSLQIRQLR----------SMYLLQRQR--QLQRQLIDNQNYIKAIADPVQPS 704
                      |.::..:..:.          ..|.|.|:.  :.::..:.|...|..|...:|. 
  Rat   444 ----------RIKTCSVSDIEIENGFFSESDYTYALNRKTRYRCKQGYVTNTGEISGIITCLQD- 497

  Fly   705 VHRVKRSASPHPN-----SQPYASDVDRAYSKYYQKIKER--YQRYVRKMLGRDRIYQRLHSQDA 762
                  ..||.|:     ..|...:.....:..:.|:.::  |:.::    |.:..|:  |::  
  Rat   498 ------GWSPRPSCIKSCDMPVFENAMTKNNNTWFKLNDKLDYECHI----GYENEYK--HTK-- 548

  Fly   763 VGRVGNNLNTHDGGQVTMRGKSNFREFENGNNYLGSGGIGSGGVVGSGVVALPNINQASRNHQVH 827
                |:...|:||...|    .:..|.|                     .::|.::|       .
  Rat   549 ----GSITCTYDGWSST----PSCYERE---------------------CSIPLLHQ-------D 577

  Fly   828 VNRTPKEELLSNG-SPPIASRSLHLNATRSYIEQLKSQIVRRRRRRSSSIGQSPPPSGATIPDAE 891
            :...|:|.....| |...:.||.|         ::.:.:|     :....|.||     ..|..|
  Rat   578 LVVFPREVKYKVGDSLSFSCRSGH---------RVGADLV-----QCYHFGWSP-----NFPTCE 623

  Fly   892 VDISDGGEAGKGGGGKRLRGPCEE-LEWDSFANVTTVRPGKVPGRNAV----GIMLHLECNAGFK 951
            ..:..                |:: ||         :..|::.|...|    |.::..:|...|.
  Rat   624 GQVKS----------------CDQPLE---------IPNGEIKGTKKVEYSHGDVVEYDCKPRFL 663

  Fly   952 LNIKGENATARCIRGIWKPETPKCL--SAPC-LVPAVEHGQYYKVEPHTKQLSDKPSLTPLSTYE 1013
            |  ||.| ..:|:.|.| ...|.|:  ...| .:||:|||        :.|||..|       |.
  Rat   664 L--KGPN-KIQCVDGKW-TTLPICVEYERTCGDLPALEHG--------SVQLSVPP-------YH 709

  Fly  1014 EIQSNEFITLECEDGFNIQGSAQLRCAHGSWSVNAFSECTSV----PCTLPNIPGVIYDGGYRAG 1074
            ...|.||   .|.:.|.:.|.|.:.|..|.|:  ...:|.:.    .|..|...|:  |..:...
  Rat   710 HGDSVEF---TCAETFTMIGHAVVFCISGRWT--ELPQCVATDQLEKCKAPKSTGI--DAIHPNK 767

  Fly  1075 LTIGHGSSVSVRCELSTNANPIEMSCHKGILTPPSIPCESGLRKSREELEHATP-----TPHPKV 1134
            ....|..|||.||                              :.::|.||:..     .|.|..
  Rat   768 NEFNHNFSVSYRC------------------------------RQKQEYEHSICINGRWDPEPNC 802

  Fly  1135 EHNELDNDHDHHDNGTDEHDDMKMCGPPMLTDGALVYKNADHPELDGAYESGTEIFFNCIPNAAG 1199
            ..||                 .:.|.||              |:               ||||  
  Rat   803 TRNE-----------------KRFCPPP--------------PQ---------------IPNA-- 819

  Fly  1200 DRQTWRIICDNGLWIGRSYNCENGTCVFRNNEANVVSFYNDLEIREDVVDFPPGATIISRCMDIG 1264
                                                      ::.|..|.:..|..:...|.|  
  Rat   820 ------------------------------------------QVIETTVKYLDGEKVSVLCQD-- 840

  Fly  1265 KFSFMGSHERTCIHSEWTNTKPVCSGLNQENDYAMEKAPTILFRHQNGPIAQSNDGKLIVYPGTT 1329
            .:...|..|..|.|..| .:.|.|:          ||.|                          
  Rat   841 GYLTQGPEEMVCKHGRW-QSLPRCT----------EKIP-------------------------- 868

  Fly  1330 LHMECLWMRRFGNPKWNVSHTHKNYTEGWVTEADEGRDSTLEYRLSIVDAASDDSGFYSCMTPAR 1394
                                                                       |..|.:
  Rat   869 -----------------------------------------------------------CSQPPK 874

  Fly  1395 HEHTVEVVVRAINCPEIPMRRGLIVNTNDTKLSTRALLSCANGNSLIGASELFCLPSGNWSAPLP 1459
            .||      .:|..|.....|.||.:::....:|.:.: |.:|..:...:.:.| ..|.||: ||
  Rat   875 IEH------GSIKSPRSSEERDLIESSSYEHGTTFSYV-CDDGFRISEENRVTC-NMGKWSS-LP 930

  Fly  1460 VCESVECG---DIPLGMGSNASSPRVSVLSREVGGRAAFSCASGYGLRGPAEAICNPTGEWSAPL 1521
            .|..:.||   .||||:.|:      .:.|.:.|....::|:.|:|:.|||...| ..|:||.| 
  Rat   931 RCVGIPCGPPPSIPLGIVSH------ELESYQYGEEVTYNCSEGFGIDGPAFIKC-VGGQWSEP- 987

  Fly  1522 PTCVEVQCDNPGAPQNGYAQGS----APYRAGDVVQFNCNPEYMMQGQPIIACQDNARWSG---- 1578
            |.|::..|||  .|....|:.:    ..||:|:.|.|.|.|.|.|.|..|:.|. |.:|.|    
  Rat   988 PKCIKTDCDN--LPTFEIAKPTEKKKKSYRSGEQVTFRCPPPYRMDGSDIVTCV-NTKWIGQPVC 1049

  Fly  1579 --------------------------------------------------GL----PKCVQA--- 1586
                                                              |:    |||..:   
  Rat  1050 KDNSCVNPPHVPNATILTRHKTKYPSGDKVRYDCNKPFELFGEVEVMCQNGIWTEPPKCKDSTGK 1114

  Fly  1587 CSYPGTVISGRMSSVKF-YYAIGESITFTCDAGLDLRGSKVLKCLKNGKWSSAIPTCV 1643
            |..|..:.:|.::|:.. .||...|:.:.|.....|:|:|::.| :|||||.. |||:
  Rat  1115 CGPPPPIDNGDITSLSLPVYAPLSSVEYQCQNYYLLKGNKIVTC-RNGKWSQP-PTCL 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 PHA02927 114..360 CDD:222943 57/252 (23%)
CCP 121..175 CDD:153056 13/53 (25%)
CCP 180..241 CDD:153056 1/60 (2%)
CCP 245..300 CDD:153056 21/58 (36%)
CCP 307..361 CDD:153056 15/56 (27%)
CCP 365..420 CDD:214478 13/62 (21%)
PHA02927 <497..>654 CDD:222943 41/167 (25%)
Sushi 515..576 CDD:278512 17/71 (24%)
PHA02927 <946..1111 CDD:222943 43/171 (25%)
CCP 1408..1462 CDD:153056 13/53 (25%)
CCP <1488..1525 CDD:153056 13/36 (36%)
CCP 1529..1584 CDD:153056 23/116 (20%)
CCP 1587..1643 CDD:153056 19/56 (34%)
CfhNP_569093.2 PHA02927 1..262 CDD:222943 77/339 (23%)
CCP 21..77 CDD:214478 18/106 (17%)
CCP 85..142 CDD:153056 21/58 (36%)
CCP 146..206 CDD:153056 15/59 (25%)
CCP 212..263 CDD:153056 12/61 (20%)
PHA02927 262..507 CDD:222943 63/324 (19%)
CCP 270..320 CDD:214478 12/81 (15%)
CCP 394..442 CDD:214478 14/60 (23%)
CCP 454..506 CDD:153056 10/58 (17%)
PHA02927 505..744 CDD:222943 67/350 (19%)
CCP 569..623 CDD:153056 14/79 (18%)
CCP 629..684 CDD:153056 17/67 (25%)
CCP 690..744 CDD:153056 21/73 (29%)
Sushi 810..863 CDD:278512 19/128 (15%)
CCP 869..932 CDD:214478 18/71 (25%)
CCP 937..991 CDD:153056 21/61 (34%)
CCP 995..1050 CDD:153056 20/57 (35%)
CCP 1054..1109 CDD:153056 3/54 (6%)
CCP 1115..1169 CDD:153056 18/55 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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