DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hasp and Apoh

DIOPT Version :9

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:NP_038503.4 Gene:Apoh / 11818 MGIID:88058 Length:345 Species:Mus musculus


Alignment Length:361 Identity:93/361 - (25%)
Similarity:134/361 - (37%) Gaps:83/361 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 RSCGQPPDPAYGW--HAGECYTYGCKITYNCGTGYELVGKHERY-CQSDGSWTPKELPTCVLVTS 304
            |.|.:|.|..:..  .....|..|.:|.|:|..||...|...|: |...|.| |.....||   .
Mouse    21 RICPKPDDLPFATVVPLKTSYDPGEQIVYSCKPGYVSRGGMRRFTCPLTGMW-PINTLRCV---P 81

  Fly   305 VVCPTPENPKNGKATYTTLAYNSVVSYECRYGYTLVGESSSRCGADRKWSGTLPTCKEINCGHPG 369
            .|||.....:||...||:..|...:|:.|..|:.|.|.|||:|..:.|||..:|.|..|.|..|.
Mouse    82 RVCPFAGILENGIVRYTSFEYPKNISFACNPGFFLNGTSSSKCTEEGKWSPDIPACARITCPPPP 146

  Fly   370 VLYNGWIENIEAGTGLGA----SIIFRCQPEMMINGLGSSVCQIDGRWRNALPECL-APCVVPTI 429
            |.....:::.....|..:    :::|:|.|...:.|..:.:|...|.| ..||||| ..|..|..
Mouse   147 VPKFALLKDYRPSAGNNSLYQDTVVFKCLPHFAMIGNDTVMCTEQGNW-TRLPECLEVKCPFPPR 210

  Fly   430 SQGNV--YPIE--IITDENGTTIVHPPTTTTQSPTQTQSIGGVEKVKHGTALEVKCDENYEFPVS 490
            .:...  ||.:  ::..:..|...|          :|..:.|.|        |.:|.:       
Mouse   211 PENGYVNYPAKPVLLYKDKATFGCH----------ETYKLDGPE--------EAECTK------- 250

  Fly   491 LLSPPTCNNGTWSIIPRCVPARCK---------------SMPRPPKHGMVMAPKTEHGMKARFKC 540
                    .||||.:|.|..: ||               .:....|:||:      ||.|..|.|
Mouse   251 --------TGTWSFLPTCRES-CKLPVKKATVLYQGMRVKIQEQFKNGMM------HGDKIHFYC 300

  Fly   541 KDGFKLVSPEGKDVTDPHDYVLTCSFGNWTGETPKC 576
            |:..|..|           |.:.....:.|.|.|.|
Mouse   301 KNKEKKCS-----------YTVEAHCRDGTIEIPSC 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 PHA02927 114..360 CDD:222943 40/119 (34%)
CCP 121..175 CDD:153056
CCP 180..241 CDD:153056
CCP 245..300 CDD:153056 16/57 (28%)
CCP 307..361 CDD:153056 20/53 (38%)
CCP 365..420 CDD:214478 13/58 (22%)
PHA02927 <497..>654 CDD:222943 24/95 (25%)
Sushi 515..576 CDD:278512 15/60 (25%)
PHA02927 <946..1111 CDD:222943
CCP 1408..1462 CDD:153056
CCP <1488..1525 CDD:153056
CCP 1529..1584 CDD:153056
CCP 1587..1643 CDD:153056
ApohNP_038503.4 PHA02927 22..260 CDD:222943 73/275 (27%)
CCP 23..80 CDD:153056 16/57 (28%)
CCP 84..137 CDD:153056 20/52 (38%)
Sushi 142..200 CDD:278512 13/58 (22%)
CCP 205..261 CDD:153056 16/88 (18%)
Sushi_2 261..345 CDD:286149 18/83 (22%)
Sushi-like 263..345 18/81 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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