DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hasp and Apoh

DIOPT Version :10

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:NP_038503.4 Gene:Apoh / 11818 MGIID:88058 Length:345 Species:Mus musculus


Alignment Length:361 Identity:93/361 - (25%)
Similarity:134/361 - (37%) Gaps:83/361 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 RSCGQPPDPAYGW--HAGECYTYGCKITYNCGTGYELVGKHERY-CQSDGSWTPKELPTCVLVTS 304
            |.|.:|.|..:..  .....|..|.:|.|:|..||...|...|: |...|.| |.....||   .
Mouse    21 RICPKPDDLPFATVVPLKTSYDPGEQIVYSCKPGYVSRGGMRRFTCPLTGMW-PINTLRCV---P 81

  Fly   305 VVCPTPENPKNGKATYTTLAYNSVVSYECRYGYTLVGESSSRCGADRKWSGTLPTCKEINCGHPG 369
            .|||.....:||...||:..|...:|:.|..|:.|.|.|||:|..:.|||..:|.|..|.|..|.
Mouse    82 RVCPFAGILENGIVRYTSFEYPKNISFACNPGFFLNGTSSSKCTEEGKWSPDIPACARITCPPPP 146

  Fly   370 VLYNGWIENIEAGTGLGA----SIIFRCQPEMMINGLGSSVCQIDGRWRNALPECL-APCVVPTI 429
            |.....:::.....|..:    :::|:|.|...:.|..:.:|...|.| ..||||| ..|..|..
Mouse   147 VPKFALLKDYRPSAGNNSLYQDTVVFKCLPHFAMIGNDTVMCTEQGNW-TRLPECLEVKCPFPPR 210

  Fly   430 SQGNV--YPIE--IITDENGTTIVHPPTTTTQSPTQTQSIGGVEKVKHGTALEVKCDENYEFPVS 490
            .:...  ||.:  ::..:..|...|          :|..:.|.|        |.:|.:       
Mouse   211 PENGYVNYPAKPVLLYKDKATFGCH----------ETYKLDGPE--------EAECTK------- 250

  Fly   491 LLSPPTCNNGTWSIIPRCVPARCK---------------SMPRPPKHGMVMAPKTEHGMKARFKC 540
                    .||||.:|.|..: ||               .:....|:||:      ||.|..|.|
Mouse   251 --------TGTWSFLPTCRES-CKLPVKKATVLYQGMRVKIQEQFKNGMM------HGDKIHFYC 300

  Fly   541 KDGFKLVSPEGKDVTDPHDYVLTCSFGNWTGETPKC 576
            |:..|..|           |.:.....:.|.|.|.|
Mouse   301 KNKEKKCS-----------YTVEAHCRDGTIEIPSC 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 CCP 121..175 CDD:153056
PHA02927 182..421 CDD:222943 56/184 (30%)
PHA02927 <497..>654 CDD:222943 24/95 (25%)
PHA02927 <946..1111 CDD:222943
CCP 1408..1462 CDD:153056
PHA02927 <1488..1643 CDD:222943
ApohNP_038503.4 PHA02927 22..260 CDD:222943 73/275 (27%)
Sushi_2 261..345 CDD:430371 18/83 (22%)
Sushi-like 263..345 18/81 (22%)
Blue background indicates that the domain is not in the aligned region.

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