DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hasp and csmd1

DIOPT Version :10

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:XP_031758587.1 Gene:csmd1 / 100491216 XenbaseID:XB-GENE-6030644 Length:3571 Species:Xenopus tropicalis


Alignment Length:1783 Identity:386/1783 - (21%)
Similarity:581/1783 - (32%) Gaps:559/1783 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 AQPSLGQV--TVAGRHFGARASYACPHGYHVVGLQSRLCQADGNWAGAEPACKQNIYCLKPPQIE 187
            |||. |::  :::|.|.|.....|..:  |::   .|....:|     .||...:......|:..
 Frog  1695 AQPQ-GRLLSSLSGSHTGETMPLATTN--HIL---LRFSTTNG-----APARGFHFVYQA
VPRTS 1748

  Fly   188 HARNSALPEQE-------TFDLDSTVQYHCHTGYVTNGFPRAKCLAIDN-LASWYGPDIQCEPRS 244
            ..:.|::||..       .|...|.|::.|:.||:..|.....|..:.| ||.|......|....
 Frog  1749 DTQCSSVPEPRYGRRIGAEFSAGSVVRFECNPGYLLQGSKAIHCQRVPNALAQWNNTVPTCVVPC 1813

  Fly   245 CGQPPDPAYGWHAGECYTYGCKITY----NC--------GTGYEL-----VGKH-----ERYCQS 287
            .|...|     ..|...:.|....|    ||        |:|.::     ..:|     |.|..|
 Frog  1814 SGNFTD-----RRGTILSPGFPEPYSNSLNCIWKIIVTEGSGIQIQVLSFATEHNWDSLEIYDGS 1873

  Fly   288 D------GSWTPKELPTCVLVTS---------------------------VVCPTPENPKNGKAT 319
            |      ||::...:|..:..||                           ..||.|..|.||...
 Frog  1874 DTTAPRLGSFSGTTVPALLNSTSNQLYLHFHSDISVSAAGFHLEYKTVGLTACPEPLVPNNGIKN 1938

  Fly   320 YTTLAYNSVVSYECRYGYTLVGESSSRC--GADRKWSGTLPTCKEINCGHPGVLYNGWIENIEAG 382
            ......|.|||::|..||||.|.|...|  |..|:|:...|.| ...||  |.|           
 Frog  1939 GDRYMVNDVVSFQCEPGYTLQGHSHISCMPGTVRRWNYPSPLC-IARCG--GTL----------- 1989

  Fly   383 TGLGASIIFRCQPEMMINGLGSSVCQIDGRWRNALPECLAPCVVPTISQGNVYPIEIITDENGTT 447
            |.:...|:....|       |:....:|..|:...|          :..|.....|..:.|....
 Frog  1990 TSMSGVILSPGFP-------GNYPSNLDCTWKIIFP----------VGYGAHIQFENFSTEANHD 2037

  Fly   448 IVHPPTTTTQSPTQTQSIGGVEKVKHGTALEVKCDENYEFPVSLLSPP-----------TCNNGT 501
            |:.                 ::...:.|:.::......:.|.||||..           :.|...
 Frog  2038 ILE-----------------IQNGPYHTSSQIGQFSGADLPPSLLSTTHEVLIHFFSDHSENKKG 2085

  Fly   502 WSIIPRCVPARCKSMPRPPKHGMVMAPKTEHGMKARFKCKDGFKLVSPEGKDVTDPHDYVLTCSF 566
            :.::.:....:....|.|.|:|.::......|....|:|..|:.||.          |.||||..
 Frog  2086 FKLVYQAYELQNCPDPHPFKNGYIINSDYSVGQSISFECYPGYVLVG----------DVVLTCQH 2140

  Fly   567 G---NWTGETPKCDEVFCSFPGYIPNGKVLLVGNMGLYDYRPYVKKIVNNKQIMYDCDKGYVLEV 628
            |   ||....|:| |..|.:.....||.:          |.|                 |:..|.
 Frog  2141 GINRNWNHPFPRC-EAPCGYNVSSENGTI----------YSP-----------------GFPDEY 2177

  Fly   629 GPPGATCVGGKWRPLDLPQCLLGQHPRLRWNRRRRRSLQIRQLRSMYLLQRQRQLQRQLIDNQNY 693
             |....|.                     |      .:.:.|...:|:  ....||.:.::  :|
 Frog  2178 -PNSMDCT---------------------W------FISVLQGHGVYI--NFTLLQTEPVN--DY 2210

  Fly   694 IKAIADPVQPSVHRVKRSASPHPNSQPYA-----SDVDRAYS-------KYYQKIKE------RY 740
            | |:.|             .|..|||...     :.::.|||       |::.....      .:
 Frog  2211 I-AVWD-------------GPDQNSQQLGVFSGNTALETAYSSSNHVLLKFHSDFSTGGFFVLNF 2261

  Fly   741 QRYVRKMLGRDRIYQRLHSQDAVGR---VGNNLNTHDGGQVTMRGKSNFR--------------- 787
            ..|..|         :.|...||..   :.::.:...|..|..|.:..|.               
 Frog  2262 HAYHLK---------KCHPPPAVPEADIISDDDDYEIGDFVKYRCRPGFTLVGNDMITCKMVVQL 2317

  Fly   788 EFE------------NGNNYLGSGGIGSGGVVGSGVVALPNINQAS--------RNHQVHVNRTP 832
            :||            |......||.|.|.|..|:    .||....|        .|..::|....
 Frog  2318 QFEGSLPKCEAQCPANEMRLESSGVILSPGYPGN----YPNSQTCSWTIKVEPGYNISIYVETFQ 2378

  Fly   833 KEELL---------SNGSPPIASRSLHLNATRSYIEQLKSQIVRRR-------RRRSSSIGQSPP 881
            .|:..         |..|..:|:.|.:|...:::..  ||.|:..|       .:|...|..|  
 Frog  2379 SEKQFDELEIFDGPSGQSSLMAALSGNLTQQQNFTS--KSNIIFLRWSADHATSKRGFKIRYS-- 2439

  Fly   882 PSGATIPDAEVDISDGGEAGKGG---GGK------------------RLRGPCEELEWDS---FA 922
               |:.......|::||...|.|   |.|                  .:|......||.|   ..
 Frog  2440 ---ASYCSLNTVITNGGILNKTGIELGAKVYYFCKPGYKMIGYNYATCIRNSNGMYEWASSVPIC 2501

  Fly   923 NVTTVRPGKVPGRNAV-------GIMLHLECNAGFKLNIKGENATARCIR-GIWKPETPKCLSAP 979
            ...:....:.||..:|       |..:..|||.|::|. ..:.:||.|.. |.|.....:.:..|
 Frog  2502 KAVSCGIAQSPGNGSVSGNEFTLGSKVTYECNEGYRLQ-SSQQSTAVCQEDGSWSNAGKQPVCQP 2565

  Fly   980 CLVPAVEHGQYYKVEPHTKQLSDKPSLTPLSTYEEIQSNEF---ITLECEDGFNIQGSAQLRC-A 1040
            ...|.::           .|||:..:...:|.|    .||:   :.|.|..|:.:.|...|:| |
 Frog  2566 ITCPTID-----------TQLSEHVTWRLVSGY----LNEYGSQVLLSCSPGYYLGGIRLLQCRA 2615

  Fly  1041 HGSWSVNAFS-ECTSVPC-TLPNIPGVIYDGGYRAGLTIGHGSSVSVRCELS-TNANPIEMSC-H 1101
            :|:||..... .|..:.| .||:.|     .|.:.|....:|::....|... |.|......| .
 Frog  2616 NGTWSGGDLKPSCKVISCGDLPSPP-----NGNKIGTLNIYGATTIFTCNTGYTLAGSHVRECLA 2675

  Fly  1102 KGILTPPSIPCESGLRKSREELEHATPTPHPKVEHNELDNDHDHHDNGTDEHDDMKMCGPPMLTD 1166
            .|:.:.....|.:|         |. .:|.|.|      |.|...| |....|            
 Frog  2676 NGLWSGSETRCLAG---------HC-GSPDPIV------NGHISGD-GFSYRD------------ 2711

  Fly  1167 GALVYK-NADHPELDGAYESGTEIFFNCIPNAAGDRQTWRIICDNGLWIGRSYNCENGTCVFRNN 1230
             .:||: |:      |....||.:               ||...:..|.|::..|...||....|
 Frog  2712 -TVVYQCNS------GFRLVGTSV---------------RICLQDHKWSGKAPVCVPITCGHPGN 2754

  Fly  1231 EANVVSFYNDLEIREDVVDFPPGATIISRCMDIGKFSFMGSHERTC-IHSEWTNTKPVCSGLNQE 1294
            .||.|:..::..: .|||:|        .| :|| :...|:::..| .:..|::..|.|..:|..
 Frog  2755 PANGVTSGSEFNL-NDVVNF--------TC-NIG-YVLQGAYQAQCRSNGLWSSPLPHCRVVNCT 2808

  Fly  1295 NDYAMEKAPTILFRH--QNGPIAQSNDGKLIVYP--------GTTLHMEC----LWMRRF----- 1340
            :...:|.|    .||  ||.| .....||.:.|.        |::: :.|    ||.|..     
 Frog  2809 DPGFVENA----IRHGQQNYP-ESFKYGKSVTYHCKKGFYLLGSSV-LYCKANGLWDRSLPKCLT 2867

  Fly  1341 ---GNP--KWNVSHTHKNYTEGWVTEADEGRDSTLEYRLSIVDAASDDSGFYSCMTPARHEHTVE 1400
               |:|  ..|...:...||.|                         ....||||    ..||:.
 Frog  2868 IACGHPGVPANALLSGDKYTYG-------------------------SKVHYSCM----GSHTLI 2903

  Fly  1401 VVVRAI------------NC----------PEIP---MRRGLIVNTNDTKLSTRALLSCANGNSL 1440
            .....:            :|          |.||   .|.|     ||.|:.:....||..|.||
 Frog  2904 GNSTRVCQEDSRWSGALPHCSGNSPGMCGDPGIPAHGSRLG-----NDFKIKSLFRFSCEMGYSL 2963

  Fly  1441 IGASELFCLPSGNWSAPLPVCESVECGDIPLGMGSNASSPRVSVLSREVG----GRAAFSCASGY 1501
            .|:.|..|:.:|:||...|.||||.||        |..||...::....|    ....::|..||
 Frog  2964 RGSMERTCMSNGSWSGIQPSCESVSCG--------NPGSPANGMIIYSDGILFSSSVIYACWEGY 3020

  Fly  1502 GLRGPAEAICNPTGEWSAPLPTCVEVQCDNPGAPQNGYAQGSAPYRAGDVVQFNCNPEYMMQGQP 1566
            ...|.....|...|.|:..:|.|..:.|:|||...||..||. .:.....|.::|||.||:. .|
 Frog  3021 KATGLTTRHCTANGTWTGSVPDCSVITCENPGPIANGIQQGK-DFTFNKTVNYHCNPGYMID-PP 3083

  Fly  1567 I---IACQDNARWSGGLPKC-VQACSYPGTVISGRMSSVKFYYAIGESITFTCDAGLDLRGSKVL 1627
            :   :.|..:..|:...|.| ..:|..|..|.:|::....  |:.|.||::||..|..|....||
 Frog  3084 VSTALMCNKDGTWNQTKPTCKAISCGLPPQVANGKLEGSD--YSWGSSISYTCIEGYQLSSPTVL 3146

  Fly  1628 KCLKNGKWSSAIPTCVTNEGPVGGGGGG 1655
            .|...|.|...||.|:    ||..|..|
 Frog  3147 SCEGRGVWRGEIPHCL----PVFCGEPG 3170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 CCP 121..175 CDD:153056 13/51 (25%)
PHA02927 182..421 CDD:222943 70/303 (23%)
PHA02927 <497..>654 CDD:222943 31/159 (19%)
PHA02927 <946..1111 CDD:222943 41/173 (24%)
CCP 1408..1462 CDD:153056 21/66 (32%)
PHA02927 <1488..1643 CDD:222943 48/162 (30%)
csmd1XP_031758587.1 CUB 43..150 CDD:238001
CCP 156..213 CDD:214478
CUB 219..322 CDD:238001
CCP 360..418 CDD:153056
CUB 422..530 CDD:412131
CCP 538..592 CDD:153056
CUB 595..702 CDD:238001
CCP 708..766 CDD:153056
CUB 769..876 CDD:238001
CCP 884..937 CDD:214478
CUB 941..1049 CDD:238001
CCP 1056..1112 CDD:153056
CUB 1115..1222 CDD:238001
CCP 1228..1285 CDD:153056
CUB 1288..1396 CDD:238001
CCP 1402..1459 CDD:153056
CUB 1462..1568 CDD:238001
CCP 1575..1632 CDD:153056
CUB 1636..1743 CDD:238001 13/58 (22%)
CCP 1752..1810 CDD:153056 15/57 (26%)
CUB 1813..1918 CDD:238001 19/109 (17%)
CCP 1926..1982 CDD:153056 23/56 (41%)
CUB 1985..2092 CDD:238001 22/153 (14%)
CCP 2098..2154 CDD:153056 20/66 (30%)
CUB 2157..2263 CDD:238001 26/178 (15%)
CCP 2269..2327 CDD:153056 9/57 (16%)
CUB 2334..2440 CDD:238001 24/116 (21%)
CCP 2443..2502 CDD:153056 11/58 (19%)
PHA02927 2501..2745 CDD:222943 67/315 (21%)
PHA02927 2630..2866 CDD:222943 68/308 (22%)
PHA02927 2827..3043 CDD:222943 59/258 (23%)
PHA02927 3043..3282 CDD:222943 44/136 (32%)
PHA02639 3237..>3347 CDD:165022
Blue background indicates that the domain is not in the aligned region.

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