DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hasp and csmd2

DIOPT Version :10

Sequence 1:NP_001137842.2 Gene:Hasp / 35238 FlyBaseID:FBgn0032797 Length:1677 Species:Drosophila melanogaster
Sequence 2:XP_017947315.2 Gene:csmd2 / 100486627 XenbaseID:XB-GENE-6044604 Length:3598 Species:Xenopus tropicalis


Alignment Length:1810 Identity:357/1810 - (19%)
Similarity:540/1810 - (29%) Gaps:660/1810 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 VTVAGRHFGARASYACPHGYHVVGLQSRLCQADGNWAGAEPACKQNIYCLKPPQIEHARNSALPE 196
            |:.||.|.          .|..|||.|  |        .|||...|               .:..
 Frog  1924 VSAAGFHL----------EY
KTVGLSS--C--------PEPAVPSN---------------GVKN 1953

  Fly   197 QETFDLDSTVQYHCHTGYVTNGFPRAKCLAIDNLASWYGPDIQCEPRSCG--------------- 246
            .|.:.::..|.:.|..||...|.....|:. ..:..|..|...|..: ||               
 Frog  1954 GERYLVNDVVSFQCEPGYALQGHSHISCMP-GTVRRWNYPPPLCVAQ-CGGVLEDMEGVILSPGF 2016

  Fly   247 ---QPPDPAYGWHAGECYTYGCKI---TYNCGTGYELV----GKHERYCQSDGSWTPKELPTCVL 301
               .|.:....|.......:|..|   :::....::.|    |.||. ....|.::..|.|..:|
 Frog  2017 PGNYPSNLDCTWKISLPVGFGAHIQFLSFSSEANHDFVEIRNGPHET-SSVIGRFSGAETPGSLL 2080

  Fly   302 VTS---------------------------VVCPTPENPKNGKATYTTLAYNSVVSYECRYGYTL 339
            .||                           ..||.||...:|............:|:||..||.|
 Frog  2081 STSHETTIYFHSDHSQNKPGFKLEYQAYELQECPDPEPFSHGVVRGAGYNVGQSISFECFPGYHL 2145

  Fly   340 VGESSSRC--GADRKWSGTLPTCKEINCGHPGVLYNG------------------WIENIEAGTG 384
            :|.|...|  |.:|.|....|.| |:.||.....:||                  |...:..|.|
 Frog  2146 IGHSVLTCQHGTNRNWDHPFPRC-EVPCGGNVTAFNGSIYSPGFPDQYPSSQDCYWTITVPLGFG 2209

  Fly   385 LGASI-IFRCQPE---------------------------MMINGLGSSVCQIDGRWRNA----- 416
            :..:. |.:.:|:                           ..::.....:.|......||     
 Frog  2210 IHINFTILQTEPQNDYITVWDGPEQTDPQLGLFTSTSTKRFALSSSNQVLLQFHSDAANAGIFAL 2274

  Fly   417 ------LPECLAPCVVPT--ISQGN-------------------VYPIEIITDENGTTIVH---P 451
                  |.:|..|..||.  :..|:                   |.| ||:|...|..::.   |
 Frog  2275 YFYGYRLRKCKPPITVPNGEVLSGSEEFLMGDIVRYKCLPGFTLVGP-EILTCRLGNHLLFEGPP 2338

  Fly   452 PTTTTQSPTQ-----------TQSIGG----------VEKVKHG--------------------- 474
            |:.....|..           :||..|          :.||:.|                     
 Frog  2339 PSCEVHCPDNEILTDSTGVILSQSFPGTYPHFQTCSWLIKVESGYNVTLSVEYFLSEKQYDEFDI 2403

  Fly   475 -------TALEVKCDENYEFPVSLLSPPTCNNGTWS---------IIPRCVPARCKSMPRPPKHG 523
                   :.|.:....||..|:::.|.....:..|:         ...|.....| |:||||.||
 Frog  2404 FDGPSGQSTLLISLSGNYSAPLTITSSGNKVHLRWTSDHAYSRKGFKIRYWALYC-SLPRPPLHG 2467

  Fly   524 MVMAPK-TEHGMKARFKCKDGFKLVSPEGKDVTDPHDYVLTC-----SFGNWTGETPKCDEVFCS 582
            .|:.|. ...|...||.|..||:|:...          ..||     .:.:|..|.|.|..:||.
 Frog  2468 TVLGPVINPPGGVVRFNCDPGFRLIGMN----------TATCLRRPQGYYDWNSEVPLCQAMFCG 2522

  Fly   583 FPGYIPNGKVLLVGNMGLYDYRPYVKKIVNNKQIMYDCDKGYVLEVGPPGAT--CV-GGKW---- 640
            .|....||.|             :.|:.....:.||:||:|:.| :.|..|.  |: .|.|    
 Frog  2523 VPASPKNGIV-------------FGKEYTVGTKAMYECDEGHHL-LNPEDAVSECLPSGHWSNGN 2573

  Fly   641 RPLDLPQCLLGQHPRL--------RWNRRRRRSLQIRQLRSMYLLQRQRQLQRQLIDNQNY---- 693
            .|   |||:....|.:        ||                           ::|...:|    
 Frog  2574 NP---PQCVAITCPDISNLNTEHGRW---------------------------RIIHKSHYHYGA 2608

  Fly   694 -IKAIADP----VQPSVHRVKRS-------ASPHPNSQPYASDVDRAYSKYYQKIKERYQRYVRK 746
             :..|.||    |.|.:.|.:.:       |:|..|.                            
 Frog  2609 ELMLICDPGYYYVGPRIIRCQANGTWSVGEATPTCNI---------------------------- 2645

  Fly   747 MLGRDRIYQRLHSQDAVGRVGNNLNTHDGGQVTMRGKSNFREFENGNNYLG-------SGGIGSG 804
                          .:.|.:....|.:..|.:|..|.:......:|...:|       |.|:.||
 Frog  2646 --------------ISCGELPTPANGNKIGMLTQYGATAIFACNSGYTLVGSRVRECMSNGLWSG 2696

  Fly   805 GVVG--SGVVALPN------INQASRNHQVHV--------------NRTPKEELLSNGSPPIASR 847
            ..|.  :|....|.      ||:.:.|::..|              .|..:::.|.:|..||.  
 Frog  2697 QEVKCLAGHCGTPEPIVNGLINEQNYNYRDSVVYQCNSGFRLIGMSVRICQQDHLWSGKAPIC-- 2759

  Fly   848 SLHLNATRSYIEQLKSQIVRRRRRRSSSIGQSPPPSGATIPDAEVDISDGGEAGKGGGGKRLRGP 912
                                                        |.|:.|.....|.|       
 Frog  2760 --------------------------------------------VPITCGHPGNPGNG------- 2773

  Fly   913 CEELEWDSFANVTTVRPGKVPGRNAVGIMLHLECNAGFKLNIKGENATARC-IRGIWKPETPKCL 976
               :...|..|:..|              :...||.|:  .|:| :..|:| ..|.|....|.|.
 Frog  2774 ---ITQGSQFNLYDV--------------VKFVCNPGY--IIEG-SVQAQCQPNGQWSHPMPTCR 2818

  Fly   977 SAPCLVPA-VEHGQYYKVEPHTKQLSDKPSLTPLSTYEEIQSNEFITLECEDGFNIQGSAQLRC- 1039
            ...|..|. ||:|.       .:.|...|......|        .:|.||..|:.:.|:..|.| 
 Frog  2819 ILNCTDPGHVEYGL-------RRVLQKGPDRFSFGT--------SVTYECSHGYYLMGTHVLSCQ 2868

  Fly  1040 AHGSWSVNAFSECTSVPCTLPNIPGVIYDGGYRAGLTIGHGSSVSVRCELSTNANPIEMSC-HKG 1103
            ..|:|. .|...|..|.|..|.:|......|.|  .|:|               :.::.|| .:.
 Frog  2869 GDGTWD-RALPRCLLVTCGAPGLPPNAQISGKR--FTVG---------------SVVQYSCLGRR 2915

  Fly  1104 ILTPPSIPCESGLRKSREELEHATPTPHPKVEHNELDNDHD---HHDNGTDEHDDMKMCGPPMLT 1165
            ||                 :.:||.|       .:||....   .|.:|....:    ||.|   
 Frog  2916 IL-----------------IGNATRT-------CQLDGRWSGFLPHCSGGSAGE----CGDP--- 2949

  Fly  1166 DGALVYKNADHPELDGAYESGTEIFFNCIPNAAGDRQTWRIICDNGLWIGRSYNCENGTCVFRNN 1230
              .:.:......|   .:.:|:.:.|:|.|.........|....||.|.|....||..:|.....
 Frog  2950 --GVPFHGLSQGE---EFTAGSVVRFSCEPGYLLRGSAERSCLINGSWGGFQPECEVVSCGNPGT 3009

  Fly  1231 EANVVSFYNDLEIREDVVDFPPGATIISRCMDIGKFSFMGSHERTC-IHSEWTNTKPVC------ 1288
            .:|....:||        .....::||..|.: |.:| .|...|.| ::..||.|.|.|      
 Frog  3010 PSNSRVVFND--------GLVFSSSIIYECRE-GYYS-SGPLSRHCTVNGTWTGTAPDCAVINCG 3064

  Fly  1289 ------SGLNQENDYAMEKAPTILFRHQNGPIAQSNDGKLIVYPGTTLHMECLWMRRFGNPKWNV 1347
                  :||...:|:.        :.|                   |:..:||            
 Frog  3065 DPGIPANGLRLHHDFQ--------YNH-------------------TVSFQCL------------ 3090

  Fly  1348 SHTHKNYTEGWVTEADEGRDSTLEYRLSIVDAASDDSGFYSCMTPARHEHTVEVVVRAINCPEIP 1412
                    .|::.|                   ||.:....| |..|..:..:.:.:||.||..|
 Frog  3091 --------PGYMME-------------------SDKAPMLLC-TKDRTWNGTKPLCKAITCPSPP 3127

  Fly  1413 -MRRGLIVNTNDTKLSTRALLSCANGNSLIGASELFCLPSGNWSAPLPVCESVECGDIPLGMGSN 1476
             :..|..|. :|....:....:|..|..|...:.|.|..:.:|...||.|..|.|||        
 Frog  3128 VIPNGKAVG-SDFLWGSSLTYTCVEGYQLSLPAVLTCESNRSWVGELPQCFPVFCGD-------- 3183

  Fly  1477 ASSPRVSVLSREVG------GRAAFSCASGYGLRGPAEAICNPTGEWSAPLPTCVE---VQCDNP 1532
               |.:...:|.|.      ...:|||.....|.|.....|...|.||...|:|::   ..|.:|
 Frog  3184 ---PGIPAHARRVDRGFSYRSSISFSCPPPLVLVGSVRRFCQSDGTWSGTQPSCIDPSHTTCTDP 3245

  Fly  1533 GAPQNGYAQGSAPYRAGDVVQFNCNPEYMMQGQPIIACQDNARWSGGLPKCV-QACSYPGTVISG 1596
            |.|..|....|..::.|..|.|.|...|::||.....|..|..|||..|:|: ..|..|.|....
 Frog  3246 GIPSFGMQNTSQGFQVGSTVLFRCQKGYLLQGSTTRTCLPNLTWSGVQPECIPHHCRQPETPPHA 3310

  Fly  1597 RMSSVKFYYAIGESITFTCDAGLDLR-GSKVLKCLKNGKWSSAIPTCVTNEGPVG 1650
            .:.::.. .::|.::.::|.||..|. ||:...|..:|.|:...|.|:.:..|.|
 Frog  3311 NVGALDL-PSLGYTLIYSCQAGFYLTGGSEHRTCRVDGSWTGKPPVCLADIRPSG 3364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspNP_001137842.2 CCP 121..175 CDD:153056 13/42 (31%)
PHA02927 182..421 CDD:222943 59/349 (17%)
PHA02927 <497..>654 CDD:222943 47/178 (26%)
PHA02927 <946..1111 CDD:222943 42/168 (25%)
CCP 1408..1462 CDD:153056 14/54 (26%)
PHA02927 <1488..1643 CDD:222943 46/165 (28%)
csmd2XP_017947315.2 CUB 58..165 CDD:238001
CCP 171..229 CDD:153056
CUB 234..337 CDD:238001
CCP 375..433 CDD:153056
CUB 437..546 CDD:238001
CCP 553..607 CDD:153056
CUB 610..717 CDD:238001
CCP 723..781 CDD:153056
CUB 784..891 CDD:238001
CCP 899..953 CDD:153056
CUB 956..1064 CDD:238001
CCP 1071..1127 CDD:153056
CUB 1130..1237 CDD:238001
CCP 1243..1300 CDD:153056
CUB 1303..1411 CDD:238001
CCP 1417..1474 CDD:153056
CUB 1477..1582 CDD:395345
CCP 1590..1647 CDD:153056
CUB 1651..1758 CDD:238001
CCP 1767..1825 CDD:153056
CUB 1828..1933 CDD:238001 4/18 (22%)
CCP 1941..1997 CDD:153056 14/79 (18%)
CUB 2000..2107 CDD:238001 16/107 (15%)
Sushi 2113..2168 CDD:459664 18/54 (33%)
CUB 2172..2277 CDD:238001 12/104 (12%)
CCP 2284..2342 CDD:153056 13/58 (22%)
CUB 2349..2455 CDD:238001 13/105 (12%)
PHA02927 <2478..2634 CDD:222943 46/209 (22%)
PHA02927 2645..2881 CDD:222943 60/366 (16%)
PHA02639 2822..>2999 CDD:165022 51/245 (21%)
Sushi 3004..3058 CDD:459664 16/63 (25%)
PHA02927 3058..3297 CDD:222943 69/317 (22%)
CCP 3301..3356 CDD:153056 14/55 (25%)
Blue background indicates that the domain is not in the aligned region.

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