Protein Alignment Top3alpha and AT3G42860

DIOPT Version :10

• Sequence 1: NP_523602.2
• Gene: Top3alpha / 35236
• FlyBaseID: FBgn0040268
• Length: 1250
• Species: Drosophila melanogaster
• Sequence 2: NP_189872.1
• Gene: AT3G42860 / 823332
• AraportID: AT3G42860
• Length: 372
• Species: Arabidopsis thaliana
• Alignment Length: 312
• Identity: 79/312 - (25%)
• Similarity: 112/312 - (35%)
• Gaps: 89/312 - (28%)

  Fly   956 TMPTESNGDQQLDKSLSEWIKEQDKADERPMLWGTRERASLGTAAPTPPPKPAAKRPRWDSVERD 1020
            |:|.||. |::.|..|.....|.:.|.:||.:          ::.|..|...|.|..:.|..::.
plant     5 TIPVESL-DEEDDFLLQLAAIEAEAAAKRPRV----------SSIPEGPYMAALKGSKSDQWQQS 58

  Fly  1021 STPPSSVPESETVLCTGCQQ-------PARQNTVRKNGP---------------NLGRLYYKCPK 1063
            ...|:|...|..|...|.|:       ...|:...|:.|               |.||.:||||.
plant    59 PLNPASKSRSVAVTTGGFQRSDGGGGVAGEQDFPEKSCPCGVGICLILTSNTPKNPGRKFYKCPN 123

  Fly  1064 PDE---CNFFQWADEPPSSAKSKNSTGSAPQSTTSWGSNRVVTLPSIQQSNSQRGQSSMRSNSSS 1125
            .:|   |.||||.|       :..|:|::..::.|:|:......|..|
plant   124 REENGGCGFFQWCD-------AVQSSGTSTTTSNSYGNGNDTKFPDHQ----------------- 164

  Fly  1126 TVTITQTKTKQQERNTATPGDGEEVMCNCGQLASQLTVRKDGPNQGRPFYACPTREKSCGFFKWG 1190
                                      |.||....::...|.|.|.||.||.||..|.|||||||.
plant   165 --------------------------CPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWC 203

  Fly  1191 DEDQNQGASSTSWGSANRNPPGRSQPTAITSDGPKTRRCGLCRKEGHTRNKC 1242
            ::  |..:|.||: |..:|.......|....:......|..|.||||....|
plant   204 ND--NVVSSPTSY-SVTKNSNFGDSDTRGYQNAKTGTPCYKCGKEGHWARDC 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Top3alpha	NP_523602.2	TOPRIM_TopoIA_TopoIII	27..185	CDD:173782
		TOP1Ac	194..608	CDD:238110
		zf-C4_Topoisom	658..694	CDD:307520
		zf-GRF	1033..1076	CDD:462017	20/67 (30%)
		zf-GRF	1150..1193	CDD:462017	20/42 (48%)
AT3G42860	NP_189872.1	zf-GRF	94..139	CDD:462017	16/51 (31%)
		zf-GRF	163..206	CDD:462017	21/87 (24%)
		PTZ00368	233..357	CDD:173561	7/20 (35%)