Sequence 1: | NP_523602.2 | Gene: | Top3alpha / 35236 | FlyBaseID: | FBgn0040268 | Length: | 1250 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003198651.1 | Gene: | top3b / 793414 | ZFINID: | ZDB-GENE-070705-37 | Length: | 861 | Species: | Danio rerio |
Alignment Length: | 864 | Identity: | 279/864 - (32%) |
---|---|---|---|
Similarity: | 414/864 - (47%) | Gaps: | 131/864 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LNVAEKNDAAKTIAGLLSNGAAQRREGYSVYNKVFDFEAPVRGQNAKMVMTSVSGHMMQLAFQVS 93
Fly 94 YKNWRTVDPRSLFD-APVKKGVGSDYEPIKRTLEREVRGCQGLIIWTDCDREGENIGYEIIDVCR 157
Fly 158 AI--KP---NISVYRATFSEITTVAVRRALQQLGQPDKRQSDAVDVRTELDLRTGAAITRFQTMR 217
Fly 218 LQRLFPEKIADKLISYGSCQIPTLGFVAERYKEIEAFVSEPFWKI--KVLHTIDD-LTVEFNWAR 279
Fly 280 NRLFDKEACENYLLLCLAEPDPRALVESVTVKPKHKWRPTPLDTVEMEKLGSRKLKLSAKETMTI 344
Fly 345 AEKLYTKGFISYPRTETNQFSKEFALAPLVEMQTGHRDWGAFAQRVIEWGPN-PRNGNKSDQAHP 408
Fly 409 PIHPTKLA-ENLQGNEA-RVYELVVRHFLACVSKDAVGSETLVHIDIAGEKFTANGLVIHERNYL 471
Fly 472 DVYVYDKWSAKQ-IHHYENGQRFEPTEVSLHEGATTAPPLLTEADLIALMEKHGIGTDATHAEHI 535
Fly 536 NTIKERGYIGVLDKGFLVPGVIGMGLYEGYDAMELALAKPQLRAEFELDLKLICQGQKDPKVVLT 600
Fly 601 EQIAKYKQAYQQITDKITAMDAKISARINETPAANSAVQEGADG--------------------- 644
Fly 645 ----SAPSHGII------------------------QSIFQCPKCNEAPLALKPKKNQQGWYIGC 681
Fly 682 N--NFPDCKNA-----------------VWLPTE-------CKDASVL-------------DECC 707
Fly 708 PTCGDGYRMLKF-RLSTPYYRGVFGTPSG--WYKTCLPCDNLFRTTFNINLDSVK----KVGGIV 765
Fly 766 GEVRGGGGGPGPGPGGGGS 784 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Top3alpha | NP_523602.2 | TopA | 27..618 | CDD:223624 | 232/601 (39%) |
TOPRIM_TopoIA_TopoIII | 27..185 | CDD:173782 | 63/161 (39%) | ||
TOP1Ac | 194..608 | CDD:238110 | 163/420 (39%) | ||
zf-C4_Topoisom | 657..694 | CDD:279704 | 12/55 (22%) | ||
YrdD | 658..>744 | CDD:223625 | 23/127 (18%) | ||
zf-GRF | 1033..1076 | CDD:284302 | |||
zf-GRF | 1150..1193 | CDD:284302 | |||
top3b | XP_003198651.1 | TOP1Bc | 3..709 | CDD:332419 | 252/716 (35%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG62408 | |
OrthoDB | 1 | 1.010 | - | - | D104272at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000966 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.930 |