Sequence 1: | NP_001260586.1 | Gene: | swm / 35235 | FlyBaseID: | FBgn0002044 | Length: | 1063 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005268523.1 | Gene: | RBM27 / 54439 | HGNCID: | 29243 | Length: | 1061 | Species: | Homo sapiens |
Alignment Length: | 1303 | Identity: | 323/1303 - (24%) |
---|---|---|---|
Similarity: | 488/1303 - (37%) | Gaps: | 482/1303 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEETTRFV 65
Fly 66 ERLFDAIASEEYLTVPAAPLITASSASTAELTVDQELALVIDGPQDDIEAVLVADSPPPPPKDNV 130
Fly 131 IKPDSNQVK---LEQASQDAREAEALAFISQEAGIAMHVPTDAKPAFDQHKTKDSHNQQSA-SNY 191
Fly 192 QHHHVRSASPPGRSSGVSGSGGGGPGGAGLAAGYADKENQPRDSRRRRASLRSRSRSRSRSNERA 256
Fly 257 FRRSRSRDRRVNEREKTQRQFRNKSPPGSQTDNRHHGRRNFDRRRIGGNADDRPRFGNNKSRRSH 321
Fly 322 SRSMSPERNARRNQNSPDRVQTAQANLIPAPVAPPAPVEHPA-----------SH---------- 365
Fly 366 -PRQRCRDFDEKGYCVRGETCPWDHGVNPVVFEGINNTSLMMSMREYNPDAPEIWARSGGPPPGA 429
Fly 430 GQGPVPPPTQPGQTTINPFSG---NVRPTTLMSGSGPSPMGVPNPADYARNP-----GAPPQAAM 486
Fly 487 MPFPFNP-------------------------TAVTTPLQRQLI--------------------- 505
Fly 506 ---------------------------------PIPVV------DG----APTGGVAEVGKRRF- 526
Fly 527 ---------------------ELEDTVAIADVPTKRKVP--INSR-------------------- 548
Fly 549 -------LGPRVNPNM---------QQHNSSLELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYE 597
Fly 598 GDPEAAIVTFSTHAEANVAYRSTEAVLNNRFIKVFWHND--------SSGADVGQMNQMGGGGGG 654
Fly 655 GGRKNASQYHLHNVP------------AVPT------------PNADGAKISNANPLTE--AGAG 693
Fly 694 NIGTPATEQANTAAPASMRLKLNTTTAGGSAGGAAGAGAPGSGRPLNPAANAAS----------- 747
Fly 748 -----IRKKQEEQQKAVHQLANGLRKRKQELLQSYMKQMKTALELVERMDQQDP-QRAPTLQTIK 806
Fly 807 VLQMTIDKLRKEIKADQDQLQAQMQQQQQQQQPPVKKTKEQQKKELLDMELELIAQQQEGNDTTA 871
Fly 872 IQKRLEELQ---RNLGVGSAANNKSTHYAPASGAPGGGAGRKRPNLPEGPTR---VDRRPKAIVV 930
Fly 931 TGFAAEEADFVLGHFKNFGEISKHDVDREIPQLILSYATRLNAEQAVLRGKMYKDKRLQISWAPV 995
Fly 996 VTPAPAPMAAPVEKSAAPGDMSVSLENPKQLIQSVSESESLLGSDTLPELRLEDEEEDEESEDRS 1060
Fly 1061 WRR 1063 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
swm | NP_001260586.1 | RRM1_RBM26_like | 561..634 | CDD:240703 | 43/72 (60%) |
RRM2_RBM26_like | 921..992 | CDD:240704 | 21/70 (30%) | ||
RBM27 | XP_005268523.1 | PWI | 7..72 | CDD:295364 | 39/64 (61%) |
zf-CCCH | 278..300 | CDD:279036 | 12/21 (57%) | ||
RRM_RBM27 | 600..675 | CDD:240961 | 45/74 (61%) | ||
DUF342 | <814..903 | CDD:302792 | 27/104 (26%) | ||
RRM_SF | 972..1014 | CDD:302621 | 21/70 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165147019 | |
Domainoid | 1 | 1.000 | 234 | 1.000 | Domainoid score | I2395 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2135 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 375 | 1.000 | Inparanoid score | I2109 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48662 | |
OrthoDB | 1 | 1.010 | - | - | D324834at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002919 | |
OrthoInspector | 1 | 1.000 | - | - | otm42287 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR14398 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3653 |
SonicParanoid | 1 | 1.000 | - | - | X1927 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.900 |